Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00836 ATGAAACTCAAACACATGGAGGAGCTCTTGTCATGGTTTAAGATTCTTTTTGTCTTTCTCATTACTCTGGCATTTGTGATCAAGTTTGCAGTGTTGCTCTGGTGGAGACCCAGACAAATTGAACAACATTTCTCCAAGCAGGGAATCAAGGGACCCCCATATCGTTTCTTCATTGGAAATTTAAAAGAAATTGTGGGGTTGATGATGAAGGCTTCATCTCAACCTATGCCTTTTTCTCATAACATTCTCCCTAGAGTCCTTTCTTTCTACCATCACTGGAAGAAAATTTACGGTGCAACATTCCTTGTTTGGTTTGGACCCACCGTTCGAGTCACCATCTCTGATCCAGAGCTCATCCGGGAAATCTTCACCTCCAAGTCAAAATTTTATGAGAAAATTGAAGCTCCCCAACTTATCAAACAGGTAGAAGGTGATGGACTACTTAGCCTCAAAGGAGAAAAATGGGCGCACCACAGAAGAATCATCTCTCCCACTTTTCACTGGGAAAATCTCAAAATGTTGATACCGATGATGGGAACAAGCGTGGTTGAGATGCTGGAAAAGTGGAGGGCAATGGCCGAGAAAGAAAAGGGTGAGGTGGAAATCGAAGTTTCGGAGTGGTTTCAAACCCTAACAGAAGATGTTATTACTATGGCAGCATTCGGAAGTAGCTACGAAGATGGCAAACCCATTTTCCAGCTACAATCCCAACAAATGCTCTTAGCAGCTGATGCCTTCAATAAAGACTTCATCCCAGGCTATAGATTTTTTCCGACGAGGAGGAATATAAAGTCTTGGAAATTGGGGAAGGAAATTAGGGAATCACTAGTGAAGCTCATCAATCAACGGAAAGAGAATTTGTGTGGAAATGAAGATGTGAAGAAAGGACACAAGGATTTTTTGGGGCTCATGATTAAGGCTTCTACCTCTAACGCCTTCAATGTGACGGTGGATGACATGGTGGAAGAGTGCAAGACCTTTTTCTTTGCTGGCAAACACACCACCTCCAACTTGCTGACGTGGACCACCATTCTCCTTGCTATGCACCAACAGTGGCAGGTAAAGGCACGTGAGGAGCTTCTTAGTGTGTGCGGAGCACGTGACATTCCAACCAAGGACGACCTCGCAAAGCTCAAGACATTGGCGATGATCGTGAACGAGTCCTTGAGACTGTACCCTCCAACAATAGCAACAATCAGACGAGCAAAATGTGATGTGGATCTAGGAGGTACCTATAAGATCCCATGTGGGACTGAACTCTTGATTCCCATATTGGCAGTTCATCATGATAAGGCCACGTGGGGAAGCGATGCAAACAAGTTCAATCCTGGTCGTTTCTCTAATGGTGTGTCTCGCGCTGCGAAGCACCCTTTCGCATTCATACCGTTCGGTCTTGGGTTGCGAACTTGCATTGGTCAAAACCTTGCGGTTCTTCAAACTAAATTGGCACTTTCAATCATGTTGCACCGTTTCACCTTCAAGTTGGCCCCGAGCTATCAGCATGCACCAACGGTTCTCATGCTGCTTTATCCTCAATTTGGTGCGCCCATCATTTTCAAACCTATCTCTGCAACCACAACGGATTAA 1587 0.448 MKLKHMEELLSWFKILFVFLITLAFVIKFAVLLWWRPRQIEQHFSKQGIKGPPYRFFIGNLKEIVGLMMKASSQPMPFSHNILPRVLSFYHHWKKIYGATFLVWFGPTVRVTISDPELIREIFTSKSKFYEKIEAPQLIKQVEGDGLLSLKGEKWAHHRRIISPTFHWENLKMLIPMMGTSVVEMLEKWRAMAEKEKGEVEIEVSEWFQTLTEDVITMAAFGSSYEDGKPIFQLQSQQMLLAADAFNKDFIPGYRFFPTRRNIKSWKLGKEIRESLVKLINQRKENLCGNEDVKKGHKDFLGLMIKASTSNAFNVTVDDMVEECKTFFFAGKHTTSNLLTWTTILLAMHQQWQVKAREELLSVCGARDIPTKDDLAKLKTLAMIVNESLRLYPPTIATIRRAKCDVDLGGTYKIPCGTELLIPILAVHHDKATWGSDANKFNPGRFSNGVSRAAKHPFAFIPFGLGLRTCIGQNLAVLQTKLALSIMLHRFTFKLAPSYQHAPTVLMLLYPQFGAPIIFKPISATTTD. 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00836 528 SUPERFAMILY Cytochrome P450 51 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00836 528 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00836 528 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00836 528 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00836 528 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00836 528 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00836 528 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00836 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Seca5g00836 528 Gene3D Cytochrome P450 33 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00836 528 Pfam Cytochrome P450 87 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00836 528 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00836 528 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00836 528 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00836 528 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00836 528 PANTHER CYTOCHROME P450 FAMILY MEMBER 30 515 - -
Seca5g00836 528 FunFam Cytochrome P450 734A1 34 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00836 Seca-Chr5 22278954 22284995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00836 7 523 Cytochrome P450 AT2G26710 70.307 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00836 K15639 - gmx:100786200 842.417