Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00825 ATGGGAGGTGACATGACCCCAGGAAGGACTGAACCAGTAGCAGCTGCCCAAGATGGGTTGGGGGAAGAGGATGAAGCAAGAGAGTGGGTGGCTCAGGTGGAGCCAGGAGTCCAAATCACATTCGAGACCATTCCTACTGGGGGACATGTTCTCAAGAGAATCCGCTTCAACCGAGAGATGTTTGACAGGCACCAAGCTCAAGCATGGTGGGGTGACAATTATGATAGGATCATGGAACTTTACAATGTCCAGAGTTTCAACCAAAATGTTATCAGCACTTCTCAGAGGTTTGAGGATGAGAAAGCTCTTTATTTATTTTTACCTTTTGAACAGCAAAGGGGTAGTAGCCCTGTGGCTGCATGGTTAAATTCAACAGCAAGGACTCACTACTACCAAAGCTCAGCCTCAGGAATCACTTTGGACAACATTGTTGGTGGTGAAAACTTGAATGAAGGAGGGCCATCTAATGAAGCTGCAAGAATATCCAACTCTTCTATACAGGAGACTGAATTCAACAATGGCATTGACAATGACTCAGAAAGGACTGAGCAAGATCAGCCTGGGGTGTCGATCACAATCAGGGTGCTGCCTGATGGAACAAAAGAGATTCATCGTGTCAGGTTCAGCCGTCAGATATTTGATGATGAAGGTGCCAAGCAATGGTGGGAGGAGAACAGGGAGAGGATTAAAGCAGATTACTTGTGA 705 0.4638 MGGDMTPGRTEPVAAAQDGLGEEDEAREWVAQVEPGVQITFETIPTGGHVLKRIRFNREMFDRHQAQAWWGDNYDRIMELYNVQSFNQNVISTSQRFEDEKALYLFLPFEQQRGSSPVAAWLNSTARTHYYQSSASGITLDNIVGGENLNEGGPSNEAARISNSSIQETEFNNGIDNDSERTEQDQPGVSITIRVLPDGTKEIHRVRFSRQIFDDEGAKQWWEENRERIKADYL. 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00825 234 MobiDBLite consensus disorder prediction 1 21 - -
Seca5g00825 234 Pfam Transcription factor regulating root and shoot growth via Pin3 27 81 IPR013591 -
Seca5g00825 234 Pfam Transcription factor regulating root and shoot growth via Pin3 179 233 IPR013591 -
Seca5g00825 234 ProSiteProfiles BRX domain profile. 27 82 IPR013591 -
Seca5g00825 234 ProSiteProfiles BRX domain profile. 179 234 IPR013591 -
Seca5g00825 234 PANTHER PROTEIN BREVIS RADIX-LIKE 1 4 234 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00825 Seca-Chr5 21359675 21360848 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00825 14 234 Major Intrinsic Protein MIP AT1G31880 44.248 2.86e-56 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00825 - - gmx:100819016 222.631