Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00791 ATGGATGTTGGGGATGGTTCATTTGTTAACCTAGATGACATTAGTGATAATGTTCATGATTATGGTGAGGACTTTGATGTGAATGGTCAGGAAGGTCAGAATGATTTGGGTGGTCCTAGTGTTGGTGAAGGGTTAGGTGAAACAGACCATAGGGATAAAAGAATAGAAGACATGACTGGTGATGACATCCGATGTATGGAGTTTACTAGTGAAGAGGATGGTTGTCTATTTTACCAATCATATGCAAAGTGTCATGGTTTTGTAGTTAGGAAAGATGAGGTCTATCGAGATTTTAAAGGGAATGTGATCATGCGTCAGTTTGTGTGCAACAAAGAAGGTAGTAGGAACAAAAAACATTTCATGAAGGTGGATAGGAAAAAAGAGCATAGGCCAATAACTCGTGTGAGGTGTGAAGCTAAGCTAAGAATTTGCTTAGATTATAAGACATCTAAATGGAAGGTGGTATCTTTTGTGGAGACTCATAATCATGAGCTTCCCTCTTACAGTTATGTGCATTTATTTCCTGCTTATAGAGGCCTAACTGATGCGGATAAAGCTCAAGTAGATAGGTTGCACGCATATGGTGTTAGAACATGCCACATAATGGGTTACATGTTAGATCGAAAAGGGGGATATGCTTCCCTTGGGTTTTGTAGAAAGGATTTGTATAATTATATTGAACGACAGAAACTTGAAAAGATTAAAGATGTTAGAACCACAAGCAACACTAGAACGAGGGGTTGA 744 0.3871 MDVGDGSFVNLDDISDNVHDYGEDFDVNGQEGQNDLGGPSVGEGLGETDHRDKRIEDMTGDDIRCMEFTSEEDGCLFYQSYAKCHGFVVRKDEVYRDFKGNVIMRQFVCNKEGSRNKKHFMKVDRKKEHRPITRVRCEAKLRICLDYKTSKWKVVSFVETHNHELPSYSYVHLFPAYRGLTDADKAQVDRLHAYGVRTCHIMGYMLDRKGGYASLGFCRKDLYNYIERQKLEKIKDVRTTSNTRTRG. 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00791 247 MobiDBLite consensus disorder prediction 22 53 - -
Seca5g00791 247 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 36 235 - -
Seca5g00791 247 Pfam FAR1 DNA-binding domain 77 165 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00791 Seca-Chr5 20236989 20237732 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca5g00791 FAR1 1.8e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00791 - - ccaj:109792835 256.529