Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00788 ATGGAGTTCGTTTTGCGGTCTTTTCAGCCTTCAACCATTCTTTTTCTTCTCTTCTCACTGTCAACTTTTGTTGTCTTCTTACTTTGCCTGCGTAGAAAACTCCCATACCCACCAGGTCCAAAAGGGCTACCCATCATAGGGAACATGTTGATGATGGACCAACTAACCCACCATGGTCTAGCTCGGCTCGCCAAACGTTACGGTGGGCTCTGTCATCTCAGAATGGGCACCCTCCACATTGTGGCCGTGTCGACCCCAGAAATGGCCCGTGAAGTCCTTCAGGCCCAAGACAATGTTTTCTCTAACCGGCCCGCCAACGTTGCGATCACCTACTTAACCTACAACCGGGCTGACATGGCCTTTGCAAACTACGGTCCGTTTTGGCGACATATGCGTAAAATCTGTGCGATGAAGCTGTTCAGCCGAAAACGGGGCGAGTCGTGGGCTTCTGTACGAGAGGAGGTGGAAGAAACAGTTCGAACCGTGGCAGGGAAAACCGGTTCACCGATTAACTTGGGTGAGCTAGTTTTCTCTCTGACAAGGAGCATCACCTTTAAGGCCGCGTTTGGGGCCAGCCTAAAAAACGGGCAAGAGGAATTCATGAAAATCTTGGAAGAATTTTCGAAGCTTTTTGTAGCTTTCAACTTAGCAGATTTTATTCCCTGGCTGGGTTGGTTTCATGCACAAGAATTTAATAAAAGAATGGCCAATGCACGGAAAGCACTTGATGTGTTTATTGATGAGATCATTGATGATCACATGGCAAAGAGGAAGAACAACATGGAGAAGAAGAATAATGAGAACGAAGCAGAAGCAGATATGGTTGATGAACTGATGGAGTTCCTTAACGAAGGAGATGGTGATGGTAAGCGTTTAGACAATTCACAATCGGCAACGCTGAAGCTTACTAGATATAATATCAAGGCTCTTATTATGGTAAGTGCCTAA 948 0.4631 MEFVLRSFQPSTILFLLFSLSTFVVFLLCLRRKLPYPPGPKGLPIIGNMLMMDQLTHHGLARLAKRYGGLCHLRMGTLHIVAVSTPEMAREVLQAQDNVFSNRPANVAITYLTYNRADMAFANYGPFWRHMRKICAMKLFSRKRGESWASVREEVEETVRTVAGKTGSPINLGELVFSLTRSITFKAAFGASLKNGQEEFMKILEEFSKLFVAFNLADFIPWLGWFHAQEFNKRMANARKALDVFIDEIIDDHMAKRKNNMEKKNNENEAEADMVDELMEFLNEGDGDGKRLDNSQSATLKLTRYNIKALIMVSA. 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00788 315 Coils Coil 258 278 - -
Seca5g00788 315 Gene3D Cytochrome P450 29 313 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00788 315 PANTHER CYTOCHROME P450 84A1-RELATED 9 313 - -
Seca5g00788 315 Pfam Cytochrome P450 37 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00788 315 Coils Coil 228 248 - -
Seca5g00788 315 SUPERFAMILY Cytochrome P450 29 310 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00788 Seca-Chr5 20090031 20090978 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00788 10 312 Monolignol Biosynthesis Gene Families AT4G36220 60.784 1.52e-117 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00788 K09755 - zju:107426594 380.563