Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00787 ATGGAGTTCATTTTGCGGTCTTTTCAACCTTCAACCATTCTTTTTCTTCTCTTCTCTCTGTCAACTTTTGTTGTCTTCTTACTTCGCCTACTTAGAAAACTCCCATACCCACCGGGTCCAAAAGGGCTACCCATCATAGGGAACATGTTGATGATGGACCAACTAACCCATCATGGTCTAGCTCGGCTCGCTAAACGTTACGGTGGGCTCTGCCATCTCAGAATGGGCACCCTCCACATTGTGGCCGTGTCAACCCCAGAAATGGCCCGTGAAGTCCTTCAGGCCCAAGACAACGTTTTCTCAAACCGGCCCGCTAACGTTGCGATCACCTACTTAACCTACGACCGGGCTGACATGGCCTTTGCGAACTACGGCCCGTTTTGGCGACAGATGCGTAAAATCTGTGTGATGAAGCTGTTCAGCCGAAAACGGGCCGAGTCGTGGGCTTCTGTACGAGAGGAGGTGGAAGAAACAGTTCGAACCGTGGCAGGGAAAACCGGTTCACCGGTTAACTTGGGTGAGCTAGTTTTCACTCTGACCAGGAGCATCACCTTTAAGGCTGCGTTTGGGGCCAGCCTAAAAAACGGGCAAGAGGAATTCATGAAAATCTTGCAAGAATTTTCGAAGCTTTTTGGAGCTTTCAACTTAGCAGATTTTATTCCGTGGCTGGGTTGGTTTCATGCACAAGAATTTAACAAAAGAATGGCCAATGCACGAAAAGCACTTGATGTGTTTATTGATGAGATTATTGATGATCACGTGGCAAAGAGGAAGAACAACATGGAGAAGGAGAATAATGAGAACGAAGCAGAAGCAGATATGGTTGATGAACTGATGGAGTTCCTTAACGAAGGAGATGGTGATGGTAACCGTTCAGACAATTCACAATCGGCAACGCTGAAACTTACAAGAGACAATATCAAAGCTCTTATTATGGTAAGTACCTAA 948 0.4652 MEFILRSFQPSTILFLLFSLSTFVVFLLRLLRKLPYPPGPKGLPIIGNMLMMDQLTHHGLARLAKRYGGLCHLRMGTLHIVAVSTPEMAREVLQAQDNVFSNRPANVAITYLTYDRADMAFANYGPFWRQMRKICVMKLFSRKRAESWASVREEVEETVRTVAGKTGSPVNLGELVFTLTRSITFKAAFGASLKNGQEEFMKILQEFSKLFGAFNLADFIPWLGWFHAQEFNKRMANARKALDVFIDEIIDDHVAKRKNNMEKENNENEAEADMVDELMEFLNEGDGDGNRSDNSQSATLKLTRDNIKALIMVST. 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00787 315 Coils Coil 258 278 - -
Seca5g00787 315 PANTHER CYTOCHROME P450 84A1-RELATED 9 313 - -
Seca5g00787 315 SUPERFAMILY Cytochrome P450 29 312 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00787 315 Coils Coil 228 248 - -
Seca5g00787 315 Gene3D Cytochrome P450 31 314 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00787 315 Pfam Cytochrome P450 37 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00787 Seca-Chr5 20079022 20079969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00787 10 312 Monolignol Biosynthesis Gene Families AT4G36220 60.726 2.80e-123 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00787 K09755 - zju:107426594 400.593