Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00763 ATGGGTGATAGTGAAGATGCTAATAATAATGACATGATGCAGAGGCTTCACTTGAAACAGATGGAACAATTGAGCATACCCCAATTCAATCAAATGCGAGCAAGGCATCATTTTCAACATGGTTTGATTGAAGGTAACAATAACAAAAGAGTTGGGATACCACCTTCACACCCTAACCAGATCCCACCCATTTCACCATATTCTCAGATCCCTGTTTCAAGGCCTCAAATGGCTTCTTCTCCTACACCTTCACATTCTCGATCACTCTCACAACCTTCTTTTTTCTCCCTTGATTCTCTTCCCCCTTTAAGCCCTTCTCCCTTTCGTGACTCTTCTTCAACCTCCATCTCTGACCCTCCTCCTGCTGACGTGTCCATGGAAGATCGTGACGTGAGTTCTCACTCTCTCTTGCCACCTTCATCTCCCTTTTCTAGAGCGTGTCGTGTTGGAGAGAGTTTACCTTTACCTCCTCCTCGCAAAGCTCATAGACGCTCCAACAGTGATATCCCATTTGGGTTTTCAACCGTTTTGCAATCTTCGCCACCTCTCATTCCTCTTAGGGGAAGAGAAGTAGCTAAACCTGCTAAGTTGGTCAAAAAGGAAACGACTTGGGAAAAGGGTGTTACTGTTGTTGACCATAATAATGTGGAGGGTTCTGGGGAGAAGAAATCCCCTGAAGGGGAAGTTGTGGATGATCTTTTCTCTGCTTATATGAATTTGGATAGCTTTGATGCGTTGAACTCTTTGGGGACTGATGACAAAAACAACAGTGGTGAAAATCGTGATGATTTGGATAGTAGAGCTAGTGGAACCAAGACTAATGGTGGTGATAGCAGTGATAATGAAGCTGAAAGTAGTGTTAATGAGAGTGGAGATGGTGTGCAAAGGCAACAACAAGGAATGAATAATAATAGTAATAGTTTTGGTGGTGACAAGAGGGAAGGGGTGAAGAGGAGTGCTGGTGGTGATATTGCACCTACCACTAGACACTATAGGAGTGTGTCCATGGATAGTTTCATTGGGAAGTTGAATTTCAATGATGAGTCACCTAAGCTTCCACCTTCACCTGGGTTGATTTCACCAGGCAGTAATAATGCAATTGATGGGAATTCAACAGCTTTCAGCTTGGAGTTTGGGAATGGGGAATTCAGTGGCCCTGAATTGAAGAAAATTATGGCTAATGAAAAACTTGCTGAGATTGCTTTGACAGATCCAAAGCGTGCAAAGAGGATTTTGGCTAATCGGCAATCAGCTGCACGTTCCAAAGAACGGAAGATGCGTTACATTTCAGAACTAGAACACAAGGTTCAGACTTTACAGACAGAAGCCACAACACTATCTGCACAGCTTACTCTATTACAGAGAGATTCTGTTGGACTCACTAACCAGAACAGTGAGTTGAAGTTTCGCCTTCAATCCATGGAACAACAGGCAAAACTCCGAGATGCTCTAAACGAGGCACTTACTGCTGAGGTTCAAAGACTAAAGCTTGCTACAGCTGAGCTGAATGGAGAATCACACCCTTCTAGCTGCTTGATTCCACAACATTCTGTCAACCCTCTGATGTTCCAGCAGCAACAGCAACAGCATCCTCCAACTACATCCCAACAAAACATTCATCTTCAACAGCAACAGCAGCAGAATGGTAATGGTAATGCCAACTCTAACCCCGACTTAAAACAGTAG 1686 0.4371 MGDSEDANNNDMMQRLHLKQMEQLSIPQFNQMRARHHFQHGLIEGNNNKRVGIPPSHPNQIPPISPYSQIPVSRPQMASSPTPSHSRSLSQPSFFSLDSLPPLSPSPFRDSSSTSISDPPPADVSMEDRDVSSHSLLPPSSPFSRACRVGESLPLPPPRKAHRRSNSDIPFGFSTVLQSSPPLIPLRGREVAKPAKLVKKETTWEKGVTVVDHNNVEGSGEKKSPEGEVVDDLFSAYMNLDSFDALNSLGTDDKNNSGENRDDLDSRASGTKTNGGDSSDNEAESSVNESGDGVQRQQQGMNNNSNSFGGDKREGVKRSAGGDIAPTTRHYRSVSMDSFIGKLNFNDESPKLPPSPGLISPGSNNAIDGNSTAFSLEFGNGEFSGPELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKLATAELNGESHPSSCLIPQHSVNPLMFQQQQQQHPPTTSQQNIHLQQQQQQNGNGNANSNPDLKQ. 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00763 561 MobiDBLite consensus disorder prediction 45 167 - -
Seca5g00763 561 FunFam probable transcription factor PosF21 405 458 - -
Seca5g00763 561 Gene3D - 405 457 - -
Seca5g00763 561 Coils Coil 422 456 - -
Seca5g00763 561 MobiDBLite consensus disorder prediction 209 228 - -
Seca5g00763 561 MobiDBLite consensus disorder prediction 269 310 - -
Seca5g00763 561 SUPERFAMILY Leucine zipper domain 406 457 IPR046347 GO:0003700|GO:0006355
Seca5g00763 561 CDD bZIP_plant_RF2 407 456 IPR044759 GO:0003700|GO:0006355
Seca5g00763 561 Coils Coil 485 505 - -
Seca5g00763 561 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 404 467 IPR004827 GO:0003700|GO:0006355
Seca5g00763 561 MobiDBLite consensus disorder prediction 250 329 - -
Seca5g00763 561 Pfam bZIP transcription factor 406 460 IPR004827 GO:0003700|GO:0006355
Seca5g00763 561 MobiDBLite consensus disorder prediction 70 120 - -
Seca5g00763 561 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 107 553 - -
Seca5g00763 561 SMART brlzneu 402 466 IPR004827 GO:0003700|GO:0006355
Seca5g00763 561 MobiDBLite consensus disorder prediction 524 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00763 Seca-Chr5 19194686 19199459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00763 1 525 bZIP Transcription Factor Family AT4G38900 57.420 1.37e-174 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca5g00763 bZIP_1 6.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00763 - - gmx:780560 696.427