Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00762 ATGGCTGCTTCTTCTCCAAATCTCTCTACTCTCTCTTCTTCTTCTTCATCCTTTTCCAAAACCTCCTCTCTCCATCACCCTCTCACCAACACTCGCTTCTTCACCAACAAAACCCTTCCAAAACCCACTCTTTCTCGCTCCGTCTCTCTCACCCCCAAAACTCCTTTCCTCGTTTCCTCCCAAAACCCTAATTCCGATATTGCCCCCGTTCACGATGAGAAGCCCCGAGAGGAGTGTGGCGTTGTCGGCATCTACGGTGACCCTGAGGCTTCTCGTCTCTGTTACTTGGCCCTTCACGCGCTCCAACACCGTGGCCAAGAAGGTGCTGGAATCGTCACCGTTCACAACAACGTGCTTCAATCCATAACCGGTGTGGGACTTGTTTCTGATGTTTTCAATGAATCCAAGCTTGACCAGTTACCTGGGAGTTTGGCTATTGGCCATGTTCGCTACTCCACCGCTGGTCAATCCATGCTTAAAAATGTTCAGCCTTTTGTTGCTGGGTACCGTTTTGGCTCTGTTGGGGTTGCTCATAATGGCAATTTGGTGAACTATCGCACCTTAAGGGCTAAACTTGAAGAGAATGGATCCATTTTCAACACCACTTCTGATACTGAGGTTGTGCTCCATCTTATTGCTACTTCAAAGCATAGACCTTTCATATTGAGGATTGTTGATGCTTGTGAGAAGCTTGAAGGGGCTTATTCCATTGTGTTTGTCACTGAGGATAAGCTTGTTGCGGTTAGGGATCCTTTTGGATTTAGACCTTTGGTTATGGGGAGGAGAAGTAATGGTTCTGTTGTTTTTGCCTCTGAGACTTGTGCACTTGATTTGATTGAAGCTACTTATGAGAGAGAGGTTTATCCAGGTGAGGTTTTAGTGGTGGACAAGAACGGGGTTCAGTCCCTTTGTCTTATGTCTCATCCACAGCCAAAGCAATGTATCTTTGAGCATATATACTTTGCACTGCCAAATTCAGTTGTTTTTGGGAGGTCTGTGTATGAATCTCGCAGGCAATTTGGTGAGATATTGGCTACTGAGAGCCCTGTGGATTGTGATGTTGTGATAGCTGTTCCTGATTCTGGTGTTGTGGCTGCACTTGGTTATGCTGCCAAAGCTGGGGTTCCTTTTCAGCAGGGGCTGATAAGGTCTCACTATGTTGGGAGGACTTTCATTGAGCCATCTCAGAAGATTAGGGACTTTGGTGTGAAGTTGAAGCTCTCACCTGTGCGTGCTGTGCTTGAAGGTAAGAGGGTTGTGGTTGTGGATGACTCAATTGTGAGAGGAACCACATCTTCCAAAATAGTTAGGTTGCTCAAGGAGGCAGGTGCTAAGGAAGTTCACATGAGGATTGCAAGCCCACCAATTATTGGATCTTGTTATTATGGGGTGGATACACCAAGCTCTGAGGAGTTGATATCTAATAGGATGAGTGTGGAGGAAATAAGGGAGTTTATTGGATCAGATTCACTTGCTTTTCTTCCATTTGATAGCTTGAAGAAGCTTTTGGGGAATGACTCTCCAAATTTCTGCTATGCTTGTTTCTCAGGGAATTACCCTGTTGAGCCAAGAGAACTTAAAGTGAAGAGGGTTGGTGACTTTGTGGATGATGGCTTAAATGGGAGCTGGGAATCTATTGATGGGGGTTGGGTTCAAGCAAACAGAAATCAGAAGGAGGTGAAGGCTGCTACTAGTCTTTGA 1701 0.4574 MAASSPNLSTLSSSSSSFSKTSSLHHPLTNTRFFTNKTLPKPTLSRSVSLTPKTPFLVSSQNPNSDIAPVHDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVHNNVLQSITGVGLVSDVFNESKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAKLEENGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGSVVFASETCALDLIEATYEREVYPGEVLVVDKNGVQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRQFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEEIREFIGSDSLAFLPFDSLKKLLGNDSPNFCYACFSGNYPVEPRELKVKRVGDFVDDGLNGSWESIDGGWVQANRNQKEVKAATSL. 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00762 566 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 77 526 - -
Seca5g00762 566 Gene3D - 338 502 IPR029057 -
Seca5g00762 566 CDD PRTases_typeI 341 452 IPR000836 -
Seca5g00762 566 Pfam Glutamine amidotransferase domain 157 276 IPR017932 -
Seca5g00762 566 Hamap Amidophosphoribosyltransferase [purF]. 78 519 IPR005854 GO:0004044|GO:0009113
Seca5g00762 566 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 79 302 IPR029055 -
Seca5g00762 566 MobiDBLite consensus disorder prediction 1 24 - -
Seca5g00762 566 SUPERFAMILY PRTase-like 314 525 IPR029057 -
Seca5g00762 566 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 79 298 IPR017932 -
Seca5g00762 566 CDD GPATase_N 79 329 IPR035584 -
Seca5g00762 566 Pfam Phosphoribosyl transferase domain 353 448 IPR000836 -
Seca5g00762 566 NCBIfam amidophosphoribosyltransferase 79 520 IPR005854 GO:0004044|GO:0009113
Seca5g00762 566 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 79 520 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00762 Seca-Chr5 19184603 19186303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00762 72 552 PRT Gene Family AT2G16570 87.371 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00762 K00764 - gmx:100791919 967.992