Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00760 ATGTCACCGTCGTCGTCAACCGGAAACTGCAGCAAAATCCGTCGCATTGTTCGTCTCCGGCAAATGCTTCTCCGGTGGCGAACGAAAGCGCGGTTAGCGTCGTCCGATGTTCCGGCAGGACACGTGGCGGTGTGTGTGGGTCCCAGCAGGAGGAGGTTCATCGTGCGCGCTAGTTACCTGAACCACCCGATCTTCAAGAAGCTTCTGGTAATGGCGGAGGAAGAGTACGGGTTCTGCAACCATGGCCCGCTCGCTATCCCTTGCGATGAGTCTCTATTTGAAGAGCTTCTTCGGGTCATGGCCCGACCCGAACCCAGATTCTCCACGCTCGAAGATTTCCAGAGACGCTGCCACGTGGATATCCGAAGTAGTTACCCAGATTCATGGCCCTTGCTTCATGACGATCCAATCTGCTGA 417 0.5588 MSPSSSTGNCSKIRRIVRLRQMLLRWRTKARLASSDVPAGHVAVCVGPSRRRFIVRASYLNHPIFKKLLVMAEEEYGFCNHGPLAIPCDESLFEELLRVMARPEPRFSTLEDFQRRCHVDIRSSYPDSWPLLHDDPIC. 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00760 138 Pfam Auxin responsive protein 19 99 IPR003676 GO:0009733
Seca5g00760 138 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 96 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00760 Seca-Chr5 19112343 19112759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00760 8 132 Calmodulin-binding Proteins AT4G34750 52.143 2.51e-44 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00760 K14488 - gmx:100795345 211.846