Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00730 ATGGAGGACGGCGAGCTCGATTTCTCGAACCAGGAAGTGTTCTCGAGTCCAAACATTGGCGAGATTCCTAGCAGTGGTTCAATGGATAGTTTCTTCGATGAACTCTTGAAGGACTCACACGCTTGCACTCACACCCACACTTGCAACCCTCCTGGCCCTGATTTTTCACACACCCACACTTGTTACCATGTTCATACCAAAATCGTTCCTGCACAACCTGAAGACCAGGTTGGCACCGATGATACTGCTGAGTCTGCTGAAAAGAAGTCTAAGAAACGCCCCCTTGGTAATAAAGAAGCCGTTCGCAAATACCGTGAGAAGAAGAAAGCACGTGCTGCTTCATTGGAGGATGAGGTTGTGAAATTGAGGGCTTTGAATCAACACTTGATGAGGAAGTTGCAAGGTCAGGCTGCTTTGGAGGCAGAAATTGCGAGGCTTAAGTGCTTGCTTGTTGACATCAGGGGAAGGATTGAAGGGGAAATTGGATCATTTCCTTATCAGAAATCGCCTAATTCAAACCCACCTATGGCAAACATGCCTGGTTCTTATGTGGTGAACCCTTGCAACATGCAGTGTGATGATCGGGTCTATTGCCTTCATCCGGGAGCAGATGGGAAGATTGCAGAAGGTGCTTCACTAAATGGGGAAGGACTTGGGGGTTGTGAATTTGAGAGTCTCCAGTGTCTTGCAAGCCAGAATTTGGGGATCAAGGATCTTCGTGCTTGTGGAGTTGGTCAGACAGTGTCTAATGTCAATCCTTCTACAACAAATAAAAGAAAAGGGGGATCCCGTGCAGCAACTGCTGGTTGA 810 0.4741 MEDGELDFSNQEVFSSPNIGEIPSSGSMDSFFDELLKDSHACTHTHTCNPPGPDFSHTHTCYHVHTKIVPAQPEDQVGTDDTAESAEKKSKKRPLGNKEAVRKYREKKKARAASLEDEVVKLRALNQHLMRKLQGQAALEAEIARLKCLLVDIRGRIEGEIGSFPYQKSPNSNPPMANMPGSYVVNPCNMQCDDRVYCLHPGADGKIAEGASLNGEGLGGCEFESLQCLASQNLGIKDLRACGVGQTVSNVNPSTTNKRKGGSRAATAG. 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00730 269 Pfam Basic region leucine zipper 87 142 IPR004827 GO:0003700|GO:0006355
Seca5g00730 269 MobiDBLite consensus disorder prediction 9 25 - -
Seca5g00730 269 MobiDBLite consensus disorder prediction 72 100 - -
Seca5g00730 269 MobiDBLite consensus disorder prediction 250 269 - -
Seca5g00730 269 PANTHER CCAAT/ENHANCER BINDING PROTEIN 2 165 IPR031106 GO:0003700|GO:0006351
Seca5g00730 269 MobiDBLite consensus disorder prediction 81 100 - -
Seca5g00730 269 MobiDBLite consensus disorder prediction 1 27 - -
Seca5g00730 269 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 134 IPR004827 GO:0003700|GO:0006355
Seca5g00730 269 Coils Coil 98 132 - -
Seca5g00730 269 SMART brlzneu 85 152 IPR004827 GO:0003700|GO:0006355
Seca5g00730 269 SUPERFAMILY Leucine zipper domain 89 135 IPR046347 GO:0003700|GO:0006355
Seca5g00730 269 CDD bZIP 91 144 - -
Seca5g00730 269 Gene3D - 78 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00730 Seca-Chr5 18087106 18089155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00730 1 268 bZIP Transcription Factor Family AT4G35040 63.838 4.27e-118 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca5g00730 bZIP_2 2.1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00730 K25785 - gmx:780549 441.81