Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00717 ATGTATCGGCTGAGGAGCTTGAGTTTGCAATTTGATCTCATTGTTTATGCACCATATCGCTCTATTGAAGGTTTTATAAATGATATGGAGGAATTTTGCAATGCCGGTGACGACCAACTTCAAATGCTCAAGACTTTGCAAGATACAGCTAGACTGGAAGTTGATAAAATGATGCTTACTGATGCACCACTTTTATTTCCTCCTGGGCAGGTATTCTCATAA 222 0.3919 MYRLRSLSLQFDLIVYAPYRSIEGFINDMEEFCNAGDDQLQMLKTLQDTARLEVDKMMLTDAPLLFPPGQVFS. 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00717 73 SUPERFAMILY Cyclin-like 18 71 IPR036915 -
Seca5g00717 73 Gene3D - 16 72 - -
Seca5g00717 73 Pfam Cyclin C-terminal domain 18 71 IPR031658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00717 Seca-Chr5 17625217 17626555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00717 8 71 Core Cell Cycle Gene Families AT5G27620 68.750 6.14e-27 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00717 K06634 - gmx:100790589 127.102