Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00705 ATGGCGTTGCCGGTGGTGGTGGACGCTGAGTACCTCAAGGAAGTCGACAAGGCTCGCCGCGATCTCCGCGCTCTAATCGCCAACAGAAATTGCGCTCCTCTCATGCTTCGTTTGGCCTGGCACGATGCCGGCACATACGATGCCAAGACAAAGACCGGTGGACCTAATGGTTCCATCAGGAACGAGGAAGAGTATTCTCACGGCGCCAACAATGGATTGAAGAAGGCTCTTGATTTCTGTGAGGAAGTGAAGGCAAAACATCCTAAGATCACATATGCAGACCTTTACCAGCTTGCAGGTGTTGTTGCAGTTGAGGTTACTGGGGGTCCCACAATTGACTTTGTTCCTGGAAGAAGGGTATTCCCTTCACAATCAACAAGGTTAAGAATGCATAAAAATATTTCAATGCTGTTGATAGGTGTGCCTCATCTCCGTGATATCTTTTATCGAATGGGCTTGACTGACAAGGATATTGTTGCACTGTCTGGGGGACATACACTGGGAAGAGCACATCCAGAGAGATCAGGGTTTGATGGCCCTTGGACAGCCGATCCTCTGAAGTTTGATAACTCATACTTTGTGGAACTTTTAAAAGAAGAATCTGCTGGGCTGCTAAAACTTCCAACAGACAACGCTTTATTGGACGATCCTGAATTTCGCCGTTATGTTGAGCTGTATGCGAAGGATGAGGATGCATTTTTTCGAGATTATGCTGAATCGCATAAGAAACTTTCAGAGCTTGGCTTTGTGCCAAGTTCAAAGGTGATTTCTCCTAAGGATGGGACCATACTGGCACAAGGTGCTGTTGGAGTTGTTGTTACTGCTGCAGTGGTGATCCTTAGTTACTTGTATGAAGTTCGCAAAAGAGCAAAGTAG 876 0.4658 MALPVVVDAEYLKEVDKARRDLRALIANRNCAPLMLRLAWHDAGTYDAKTKTGGPNGSIRNEEEYSHGANNGLKKALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTIDFVPGRRVFPSQSTRLRMHKNISMLLIGVPHLRDIFYRMGLTDKDIVALSGGHTLGRAHPERSGFDGPWTADPLKFDNSYFVELLKEESAGLLKLPTDNALLDDPEFRRYVELYAKDEDAFFRDYAESHKKLSELGFVPSSKVISPKDGTILAQGAVGVVVTAAVVILSYLYEVRKRAK. 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00705 291 FunFam Cytosolic ascorbate peroxidase 18 137 - -
Seca5g00705 291 Pfam Peroxidase 19 229 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00705 291 CDD ascorbate_peroxidase 4 249 - -
Seca5g00705 291 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 7 254 IPR044831 GO:0004601|GO:0034599
Seca5g00705 291 ProSitePatterns Peroxidases active site signature. 32 43 IPR019794 GO:0004601
Seca5g00705 291 Gene3D - 18 248 - -
Seca5g00705 291 FunFam L-ascorbate peroxidase, cytosolic 133 241 - -
Seca5g00705 291 Gene3D Peroxidase, domain 2 131 241 - -
Seca5g00705 291 SUPERFAMILY Heme-dependent peroxidases 19 253 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca5g00705 291 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00705 291 PRINTS Haem peroxidase superfamily signature 32 46 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00705 291 PRINTS Haem peroxidase superfamily signature 108 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00705 291 PRINTS Haem peroxidase superfamily signature 90 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00705 291 PRINTS Haem peroxidase superfamily signature 157 172 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00705 291 ProSiteProfiles Plant heme peroxidase family profile. 32 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00705 291 ProSitePatterns Peroxidases proximal heme-ligand signature. 157 167 IPR019793 -
Seca5g00705 291 PRINTS Plant ascorbate peroxidase signature 151 172 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca5g00705 291 PRINTS Plant ascorbate peroxidase signature 11 31 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca5g00705 291 PRINTS Plant ascorbate peroxidase signature 225 249 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca5g00705 291 PRINTS Plant ascorbate peroxidase signature 64 88 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca5g00705 291 PRINTS Plant ascorbate peroxidase signature 89 107 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca5g00705 291 PRINTS Plant ascorbate peroxidase signature 173 197 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca5g00705 291 PRINTS Plant ascorbate peroxidase signature 32 47 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca5g00705 291 PRINTS Plant ascorbate peroxidase signature 50 60 IPR002207 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00705 Seca-Chr5 17376793 17383085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00705 90 263 Peroxidase AT4G17690 32.057 5.83e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00705 K00434 - gmx:100170727 493.812