Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00697 ATGCATCAATACCATCTTGGACAACATGAAGAAGAGAAAGAAGGAGAGCTTTTGGTGTCAAAGATATTCTATCAGACACAGCCAAGGCAATGCAATTGGTCTGACCATAGAATAACTGGTGAAGGAATTAGTGGAGAACAACCTAACAACATTAATGTTGTTGGTGTCCCTCCAATCACAAGCTTCACCATTGCCTTGGATATTCAACACCTAAAATCAGATCATTTCAGCACCACCTTCAGCCCATTCAGAAAAACCTTCGATGAGTTAACAATTTCAGATGGTGATGTTATTTCAATGTATGGTCCATCTGTCGAACCTCTATACAGGTTGCAGATGCATAGAACAAGGAGGAAGATATCTCTAAGCGTTTCCCCTTTCCCATCTGAGATTTGCTTGAACAACCACGTGTATTCAGCAGCTTGCATCAGAAGCAGTGGCTCCTAG 447 0.4161 MHQYHLGQHEEEKEGELLVSKIFYQTQPRQCNWSDHRITGEGISGEQPNNINVVGVPPITSFTIALDIQHLKSDHFSTTFSPFRKTFDELTISDGDVISMYGPSVEPLYRLQMHRTRRKISLSVSPFPSEICLNNHVYSAACIRSSGS. 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00697 148 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 61 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00697 Seca-Chr5 17253955 17256040 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00697 1 91 NAC Transcription Factor Family AT5G56620 46.392 1.03e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00697 - - gmx:100794811 127.487