Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00694 ATGTGTCTGAAAATGGGAAAACTTGTTTTCTTCTTCTTGTTCTTCTTCCTACTTTCTCAAAACCTTTGTGTTTTTTCTGCTGATAATGAAGCTTCTTCCAAGACCTTCATCTTTCGCGTTGATTCTGAATCAAAGCCTTCTATTTTCCCCACTCATTACCACTGGTACACCTCTGAGTTCACCGAACAGACCCACATCCTCCACGTGTACGACACCGTTTTCCATGGCTTCTCTGCAGTCCTCACGCGCCAACAAGTTGCTTCCATAAGCCAACACCCTTCCATCCTCGCCGTCTTCGAGGATCGCCGCCGGCAACTCCACACCACTCGCTCACCTCAGTTCCTTGGCCTCCGCAACCAGCAAGGTCTCTGGTCAGAATCCGACTACGGCTCCGACGTCATCATCGGAGTCTTCGACACCGGCGTTTGGCCTGAGCGCCGGAGCTTCTCCGATTTAAACCTTGGCCCCATTCCTCGCCGATGGAAAGGGGTTTGTGAAACCGGTGTCAGATTCTCACCCAAAAACTGCAACAGAAAACTCATCGGTGCTAGATTCTTCTCCAAAGGTCACGAAGCAGGTGCTAGCTCAGCGGGTCCTTTGAATCCCATCAACGAAACCGTCGAATTCCGATCCCCTCGTGACGCCGACGGCCATGGAACCCACACGGCATCCACCGCCGCCGGTCGTTACTCTTTCCAAGCCAACATGTCTGGTTACGCTTCAGGGATCGCAAAAGGTGTGGCTCCGAAAGCTCGATTGGCTGTGTACAAGGTTTGCTGGAAGGATTCCGGTTGCTTCGACTCCGATATCCTCGCCGCCTTCGACGCCGCCGTGAACGACGGCGTTGATGTAATCTCCATCTCCATCGGCGGCGGAGACGGTATCGCTTCCCCTTACTATCTCGACCCCATTGCAATCGGCTCCTACGGCGCCGTTTCGCGAGGAGTCTTCGTCTCTTCCTCCGCCGGAAACGACGGACCAAGCGGAATGTCAGTGACGAACCTCGCTCCGTGGTTAACCACCGTCGGAGCAGGCACCATCGATCGGGATTTCCCTTCCACCGTGATTCTCGGCGACGGGAGAAGACTCTCCGGCGTGTCGCTCTACGCCGGAGCAGCTTTGAAGGGGAAAATGTACCCCTTAATCTACCCAGGAAAATCAGGGGTTCTAGGTGATTCACTCTGCATGGAAAATTCCCTGGATCCAAACATTGTAAGAGGGAAAATCGTGGTGTGTGACAGAGGAAGCAGCCCTAGAGTAGCGAAAGGGTTGGTGGTGAAAAAAGCAGGTGGTGTAGGAATGATTCTCGCGAACGGAATCTCAAACGGCGAAGGACTCGTCGGTGATGCTCATCTTCTTCCTGCATGTGCTGTTGGTGCAAACGAAGGTGATTCAATCAAATCCTACATCTCTTCCTCTTCAAACCCTACAGCCACACTCGATTTCAAAGGCACTATTCTCGGAATCAAACCGGCACCGGTTCTTGCTTCTTTCTCCGCTAGAGGACCGAACGGTTTGAACCCTCAGATTCTGAAACCGGATTTAATAGCTCCCGGTGTTAACATTCTCGCGGCTTGGACCGATGCGGTGGGACCCACCGGTTTGGACTCTGATTCTCGAAGAACAGAGTTCAACATACTGTCTGGTACTTCAATGGCTTGCCCTCACGTGAGTGGTGCCGCGGCGTTGTTGAAATCTGCTCATCCTGATTGGAGCCCCGCCGCTATAAGATCCGCTATGATGACAACCGCTACTGTTTTAGATAACAAGAATGGACCCATGATTGATGAAGCTACTGGGAATGTTTCCACGCCTTATGATTTCGGTGCGGGTCATCTTAATTTGGGTCAAGCTATGGATCCTGGTTTGGTTTATGATATAACTAATAATGATTATGTTAACTTCTTGTGTGGAATTGGCTACGGACCTAGGGTTATTCAAGTGATTACTCGTGTGCCGGCGAGTTGTCCGACGAGGAGGCCGGCACCGGAGAATCTGAATTACCCGTCGTTTGTGGCTATGTTCCCGGTGTCATCGAAGGGGGTGGCGACCAAGACGTTTATAAGGACGGTGACGAATGTTGGGGCGGCGAACTCGGGTTATAGGGTGAGGGTGGAGTCGCAGGTGAAAGGAGTGACGGTGACGGTGAGGCCAGGGAGGCTTGTGTTCTCGGAGGCGGTTAAGAAACGGAGCTTTGTGGTGACGGTGACGGCGGATGTACGGAACGTGAAGATGGGTCCTTCTGGAGCGGTGTTCGGGTCACTTTCGTGGACGGATGGTAAGCATGTGGTTCGGAGCCCCATTGTGGTGACTCAAATAGAACCGTTATAG 2331 0.5242 MCLKMGKLVFFFLFFFLLSQNLCVFSADNEASSKTFIFRVDSESKPSIFPTHYHWYTSEFTEQTHILHVYDTVFHGFSAVLTRQQVASISQHPSILAVFEDRRRQLHTTRSPQFLGLRNQQGLWSESDYGSDVIIGVFDTGVWPERRSFSDLNLGPIPRRWKGVCETGVRFSPKNCNRKLIGARFFSKGHEAGASSAGPLNPINETVEFRSPRDADGHGTHTASTAAGRYSFQANMSGYASGIAKGVAPKARLAVYKVCWKDSGCFDSDILAAFDAAVNDGVDVISISIGGGDGIASPYYLDPIAIGSYGAVSRGVFVSSSAGNDGPSGMSVTNLAPWLTTVGAGTIDRDFPSTVILGDGRRLSGVSLYAGAALKGKMYPLIYPGKSGVLGDSLCMENSLDPNIVRGKIVVCDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACAVGANEGDSIKSYISSSSNPTATLDFKGTILGIKPAPVLASFSARGPNGLNPQILKPDLIAPGVNILAAWTDAVGPTGLDSDSRRTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTATVLDNKNGPMIDEATGNVSTPYDFGAGHLNLGQAMDPGLVYDITNNDYVNFLCGIGYGPRVIQVITRVPASCPTRRPAPENLNYPSFVAMFPVSSKGVATKTFIRTVTNVGAANSGYRVRVESQVKGVTVTVRPGRLVFSEAVKKRSFVVTVTADVRNVKMGPSGAVFGSLSWTDGKHVVRSPIVVTQIEPL. 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00694 776 Pfam Subtilase family 130 601 IPR000209 GO:0006508|GO:0008236
Seca5g00694 776 Gene3D - 636 773 - -
Seca5g00694 776 FunFam subtilisin-like protease SBT1.5 348 487 - -
Seca5g00694 776 CDD PA_subtilisin_like 354 480 - -
Seca5g00694 776 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 107 IPR037045 -
Seca5g00694 776 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Seca5g00694 776 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Seca5g00694 776 PRINTS Subtilisin serine protease family (S8) signature 548 564 IPR015500 -
Seca5g00694 776 Pfam Peptidase inhibitor I9 49 107 IPR010259 -
Seca5g00694 776 FunFam Subtilisin-like protease SBT1.5 132 361 - -
Seca5g00694 776 ProSitePatterns Serine proteases, subtilase family, serine active site. 549 559 IPR023828 -
Seca5g00694 776 Pfam PA domain 380 466 IPR003137 -
Seca5g00694 776 Gene3D - 348 487 - -
Seca5g00694 776 Pfam Fibronectin type-III domain 665 770 IPR041469 -
Seca5g00694 776 CDD Peptidases_S8_3 105 585 IPR034197 -
Seca5g00694 776 Gene3D Peptidase S8/S53 domain 132 632 IPR036852 GO:0004252|GO:0006508
Seca5g00694 776 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 62 770 IPR045051 -
Seca5g00694 776 SUPERFAMILY Subtilisin-like 106 623 IPR036852 GO:0004252|GO:0006508
Seca5g00694 776 ProSiteProfiles Serine proteases, subtilase domain profile. 105 619 - -
Seca5g00694 776 FunFam Subtilisin-like protease SBT1.5 636 773 - -
Seca5g00694 776 MobiDBLite consensus disorder prediction 191 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00694 Seca-Chr5 17214372 17216702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00694 12 776 Subtilisin-like Serine Gene Family AT4G34980 74.316 0.0 1195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00694 - - gmx:100817537 1358.97