Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00681 ATGGGAACCTCTGATTTCTCTATTTCCACCACCACCAAATGGCTGGGCTTTGTCACCGCCGTGTGGATCCAATGTATCTCCGGCAACAACTACACTTTCTCCAATTACTCTCATGCTCTCAAAACCCTTATGCACCTCACTCAGGTGGAGCTCAACAATCTCTCCGTCGCTAAAGATGTCGGCAAGGCCTTTGGCCTTCTCGCCGGCCTTGCCTCCGATCGATTCCCCACTTGGGCCATTCTCCTCATTGGCTCCATTGAAGGCCTCATCGGCTACGGTGCTCAATGGCTCGTCGTTGGCCAAATAATTCCTCCTCTTCCATATTGGCAGATGTGTGTATTTCTATGTTTGGGAGGCAATAGCACAACATGGATGAACACTGCGGTATTAGTGACTTGTATACGCAATTTCAGAAGAAACAGAGGACCTGTTTCAGGGATTCTGAAAGGGTTTGTTGGATTGAGCACTGCTATCTTCACCAATCTTTGCTCTGCACTCTTCGCCGATGATCCTGCTTCCTTTCTTCTCATGCTGGCTATAATCCCCTTCGTTGTTTGTCTCACCGGTGTGTTTTTCCTCCGTGAGGTTCCTCCGGCTAAATCTACCACCGCCTCCGAGGACAGCGAAGAGGCAAAATACTTTGGCATATGCAACGCCATCGCCGTCGTCGTCGCGTTTTATCTATTGGCTTATGGTTTCGTGCCAAACGTTAGCGGTTTAGTGTCGAAGGTGTTCGTCGCCGTTTTGGTTGTTCTGTTGGTGTCGCCGTTGGGGATCCCGGTGTACTCTTACTTCAAAGGGAGGAATTCGACTCGGTTTGGACCGGGCGTTGACGTTGAGGGGCAGCGGGTCAATGAACCGTTGCTTCGAAGCAATGAAAAGGAAAACGTAGCCGCGGTGGTAGCGGCGGAGGAAGAGGAAGCGGTGATTGAGAAGGTGCGGCCGGCGATTGGAGAGGAGCACACGATATGGGAAGCGTTGAGGAGTTTGGATTTTTGGATCTTGTTTGTGTCGTTTCTGTGTGGGGTTGGAACGGGTTTGGCGGTGATGAACAATATGGGTCAAATCGGGTTGGCGCTCGGATACAGTGACGTGTCACTTTTTGTGTCATTGACTAGCATTTTTGGCTTTTTCGGACGGATCGTTTCGGGTTCCATTTCGGAGCTTTTCATCAAGAAAGCTGCAACGCCTAGGCCTCTTTGGAATGCAGCATCTCAGATTCTGATGGCTGTGGGATACATACTCTTGGCTATGGCTATGCCTGGTTCACTTTACATTGGCTCTATTGTAGTTGGCATATGCTATGGAGTTCGGCTTGCTGTTACAGTCCCAACAGCCTCTGAATTATTTGGACTCAAATATTATGGTCTCATCTACAACATTCTCATCCTCAACCTTCCCCTTGGTTCTTTCCTCTTTTCTGGGCTGCTTGCTGGCATTCTGTATGATATGGAGGCAACTACAACAGAAGGAGGAGGCAACACCTGTGTTGGAGGTCATTGTTACAGGCTAGTCTTTATTATTATGGCTGGAGCATGTATTGTTGGGTTCTTCTTAGACATTCTATTGTCAATCAGAACAAAGAATCTCTACAACAAGATTTACATGAGCAAGAAATCCAAGAAATCCTCAGGGACATCAAGTAGCTAA 1650 0.4824 MGTSDFSISTTTKWLGFVTAVWIQCISGNNYTFSNYSHALKTLMHLTQVELNNLSVAKDVGKAFGLLAGLASDRFPTWAILLIGSIEGLIGYGAQWLVVGQIIPPLPYWQMCVFLCLGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGFVGLSTAIFTNLCSALFADDPASFLLMLAIIPFVVCLTGVFFLREVPPAKSTTASEDSEEAKYFGICNAIAVVVAFYLLAYGFVPNVSGLVSKVFVAVLVVLLVSPLGIPVYSYFKGRNSTRFGPGVDVEGQRVNEPLLRSNEKENVAAVVAAEEEEAVIEKVRPAIGEEHTIWEALRSLDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYSDVSLFVSLTSIFGFFGRIVSGSISELFIKKAATPRPLWNAASQILMAVGYILLAMAMPGSLYIGSIVVGICYGVRLAVTVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTEGGGNTCVGGHCYRLVFIIMAGACIVGFFLDILLSIRTKNLYNKIYMSKKSKKSSGTSSS. 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00681 549 CDD MFS_Mch1p_like 13 516 - -
Seca5g00681 549 SUPERFAMILY MFS general substrate transporter 15 529 IPR036259 -
Seca5g00681 549 Gene3D MFS general substrate transporter like domains 14 277 IPR036259 -
Seca5g00681 549 Gene3D MFS general substrate transporter like domains 325 529 IPR036259 -
Seca5g00681 549 Pfam Nodulin-like 13 261 IPR010658 -
Seca5g00681 549 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00681 Seca-Chr5 16452024 16456843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00681 13 545 Nodulin-like Gene Family AT4G34950 69.245 0.0 774
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00681 - - gmx:100800237 818.15