Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g00669 | ATGGCTGCTGCTTCTCTCTATGAGGTGCTTGGAATTTCAATCGGAGCAAGCTGCCCTGAAATAAAGGCAGCTTACAGAAAGCTGGCAAGAACATGCCACCCTGATGTTGTGGCCATGAATCAGAAGGAAAGCTCAGCTAACCAGTTCATGATGGTCCATTTAGCTTATTCAACATTGTCTGACCCAGATAAGCGTGCTCAATATGACAGAGAAATCTATGGACACAGAAGATCCGCAAACATGTCAAGAAGAAATCAGTCATTTTATTCTCATGCTGGAAGGAAATGGGAAACGGACCAATGTTGGTAG | 309 | 0.4401 | MAAASLYEVLGISIGASCPEIKAAYRKLARTCHPDVVAMNQKESSANQFMMVHLAYSTLSDPDKRAQYDREIYGHRRSANMSRRNQSFYSHAGRKWETDQCW. | 103 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g00669 | 102 | Pfam | DnaJ domain | 6 | 69 | IPR001623 | - | |
Seca5g00669 | 102 | ProSiteProfiles | dnaJ domain profile. | 5 | 72 | IPR001623 | - | |
Seca5g00669 | 102 | ProSitePatterns | Nt-dnaJ domain signature. | 49 | 68 | IPR018253 | - | |
Seca5g00669 | 102 | SMART | dnaj_3 | 4 | 64 | IPR001623 | - | |
Seca5g00669 | 102 | PRINTS | DnaJ domain signature | 44 | 64 | IPR001623 | - | |
Seca5g00669 | 102 | PRINTS | DnaJ domain signature | 25 | 40 | IPR001623 | - | |
Seca5g00669 | 102 | PRINTS | DnaJ domain signature | 7 | 25 | IPR001623 | - | |
Seca5g00669 | 102 | PRINTS | DnaJ domain signature | 64 | 83 | IPR001623 | - | |
Seca5g00669 | 102 | PANTHER | DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED | 3 | 98 | - | - | |
Seca5g00669 | 102 | Gene3D | DnaJ domain | 1 | 96 | IPR036869 | - | |
Seca5g00669 | 102 | CDD | DnaJ | 7 | 61 | IPR001623 | - | |
Seca5g00669 | 102 | SUPERFAMILY | Chaperone J-domain | 3 | 75 | IPR036869 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g00669 | Seca-Chr5 | 16170545 | 16170853 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g00669 | 7 | 69 | C2H2 Transcription Factor Family | AT1G74250 | 46.269 | 1.27e-10 | 54.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g00669 | - | - | gmx:100305807 | 171.014 |