Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g00657 | ATGGCGGCTACTGTATCTGCGTGGTCTAAACCCGGGGCTTGGGCTCTGGATTCCGAGGAACACGAAGCTGAACTCCTTCAACAGAACCACCACGAAGAAACCACCAAGCCACTCGCCGACTACCCTTCCCTCGCCGTCGCCGCCGCCACTAAACCCAAGAAGAAGAAAGGCCAAACCGTTCCTTTGGCCGTCTTCAACGCCAACCCCGACGCCGCCTTCACTCAACACTACCAAGATCCCGTCGACCTCCCCACCGGTCCTCGCCAGCGAACCGCCGAGGAACTCGCCTCCGACCGGAATCGCCTCGGTGGCGGCTTTAGGTCATACGGTGACCGCCCCCATCGGAATTCCGGCGGCGACGAGTCTTCCAATTCCAGATGGGGTTCTTCTAGGGTTTCTGATGAACCTAGGCGAAACGGTTCGTTTGGGTCTAGGGATTCGAATCGCGAGTTGGCACCGTCACGTGCCGATGAAATTGATAATTGGGCTGCTGCCAAGAAATCGACTGGGAATGGGTTCGAGAGGAGGGAGAGGGAAAGGGATAGAGGTGGATTCTTCGATTCACAGTCGCGTGCTGATGAATCGGACAGTTGGGTTTCCAGTAAGAACTTTGTGCCGTCGGAGGGGGGGAGATTTGGTTCCGGCGGCGGCGGTGGGTTTGAGAGAGAGAGGAAAGTAGGGTTTGGTACCAGCGGTGGTGCTGATTCGGATAATTGGAACAAGAAGAAGGGTGAAATTAGCGTTGGGAGTGAAAGAACTGAGAGTGGTTTTGGTGGAAGGCCAAGGCTTGTGTTGCAACCTAGGTCACAATCAGTGAGTAATGAAAAAGAGGAAAGTGCTTCTGGGAATGTGGCAAAACCTAAGGGTTCAAATCCATTTGGAGAGGCAAGGCCTAGGGAGCAGGTTTTGGCTGAGAAAGGACAGGATTGGAAGAAGATTGATGAGCAACTTGAGAGCATGAAGATTAAGGAGACAGTAGCGGTGGATGCGGTTGGGAAGAGGGGTTTTGGGTCTGGTAATGGACGTGCTAGTTTGCCAGAAGATAGGACTGAGAGGAGTTGGAGGAAGGCCCTATCTGATGATGGTCGTCCAAAAAGTGCTGAGAAAGTGGAGGATGTACACGTTGAAGAAAACTGA | 1137 | 0.5347 | MAATVSAWSKPGAWALDSEEHEAELLQQNHHEETTKPLADYPSLAVAAATKPKKKKGQTVPLAVFNANPDAAFTQHYQDPVDLPTGPRQRTAEELASDRNRLGGGFRSYGDRPHRNSGGDESSNSRWGSSRVSDEPRRNGSFGSRDSNRELAPSRADEIDNWAAAKKSTGNGFERRERERDRGGFFDSQSRADESDSWVSSKNFVPSEGGRFGSGGGGGFERERKVGFGTSGGADSDNWNKKKGEISVGSERTESGFGGRPRLVLQPRSQSVSNEKEESASGNVAKPKGSNPFGEARPREQVLAEKGQDWKKIDEQLESMKIKETVAVDAVGKRGFGSGNGRASLPEDRTERSWRKALSDDGRPKSAEKVEDVHVEEN. | 379 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g00657 | 378 | MobiDBLite | consensus disorder prediction | 170 | 189 | - | - | |
Seca5g00657 | 378 | MobiDBLite | consensus disorder prediction | 190 | 204 | - | - | |
Seca5g00657 | 378 | MobiDBLite | consensus disorder prediction | 19 | 41 | - | - | |
Seca5g00657 | 378 | MobiDBLite | consensus disorder prediction | 299 | 322 | - | - | |
Seca5g00657 | 378 | Coils | Coil | 16 | 36 | - | - | |
Seca5g00657 | 378 | MobiDBLite | consensus disorder prediction | 138 | 162 | - | - | |
Seca5g00657 | 378 | Pfam | Plant specific eukaryotic initiation factor 4B | 7 | 322 | IPR010433 | GO:0003743 | |
Seca5g00657 | 378 | MobiDBLite | consensus disorder prediction | 266 | 286 | - | - | |
Seca5g00657 | 378 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B | 1 | 368 | IPR010433 | GO:0003743 | |
Seca5g00657 | 378 | MobiDBLite | consensus disorder prediction | 71 | 378 | - | - | |
Seca5g00657 | 378 | MobiDBLite | consensus disorder prediction | 345 | 378 | - | - | |
Seca5g00657 | 378 | MobiDBLite | consensus disorder prediction | 120 | 137 | - | - | |
Seca5g00657 | 378 | MobiDBLite | consensus disorder prediction | 19 | 37 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g00657 | Seca-Chr5 | 15759136 | 15761704 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g00657 | 1 | 359 | Eukaryotic Initiation Factors Gene Family | AT4G38710 | 49.377 | 2.18e-67 | 218 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g00657 | - | - | pvu:PHAVU_011G033300g | 529.25 |