Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00599 ATGATCGATGATGCTCAGCCGCTGAAGAGGCCTGTCAGTGTCGGTGCTGCTATGCCTGTCTCCACAGGGCTCTACATGAACCCACCCACACCCGGTATCCCCTCTGGATCCGATACGAGCGAGTCCAGTGTACCGGTTAACTCCTCTTCCCATGTCTACCGACCCGTGCCAAGGACCGTTCAGATGGCGGTTGCGCAGCAGTTTCATGAGCAGAAGGAGTTTCCGCCATTCAATTTCAGTGAAGAGTTGCTGGGTGTGATGCAGGAAATGATAAGGAAGCTGGAGGTGAGGAGTTATATGGCGGGGCTGGAACAACAGAATGGGATGTGTTTTCAGGCAGCTGATGATGGGTTTAGCAGGATCGATTCGTAA 372 0.5323 MIDDAQPLKRPVSVGAAMPVSTGLYMNPPTPGIPSGSDTSESSVPVNSSSHVYRPVPRTVQMAVAQQFHEQKEFPPFNFSEELLGVMQEMIRKLEVRSYMAGLEQQNGMCFQAADDGFSRIDS. 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00599 123 MobiDBLite consensus disorder prediction 32 51 - -
Seca5g00599 123 MobiDBLite consensus disorder prediction 20 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00599 Seca-Chr5 13959479 13959969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00599 3 58 MYB Transcription Factor Family AT5G67300 50.877 6.99e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00599 K09422 - gmx:778197 98.2117