Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00583 ATGGCGTATAGAATTTCAAGTATCACTAGTTTTGTTGTCATCACGTTGGTGTTGTTAGGCACAATATCAACATGTGACGCACAATTGTCATCTACGTTTTATGACAGTACATGCCCGAACGCACTAAGCACCATCAGAACTGTGATTCGTACTTCAGTTTCTAAAGAGCGTCGCATGGCTGCGTCTCTCATTCGCCTTCACTTTCATGACTGCTTTGTTCAGTTGATTGATTTGCAGGGTTGTGATGCATCAATATTGCTTGATGATAGCTCTACTATTGAGAGCGAAAAGAGTGCACTTCCAAATGTAAATTCAGTTAGGGGATTTGAAGTCATTGATAAAGCAAAAGCTGAGGTCGAGAAAGTATGCCCTGGTGTTGTCTCATGTGCTGACATCGTCGCAGTAGCAGCGCGTGATGCATCATTCGCTGTGGGTGGTCCATCATGGACGGTGAAGCTTGGACGGAGAGACTCCACCACTGCAAGCAAAAGTTTGGCTAATAATGACCTTCCATTATTTACGGACGATCTTGAAACTCTGATTTCTCGTTTTGACAAGAAAGGACTCAGCGCTAGAGACATGGTTACTCTATCTGGTGCCCATACAATAGGACAAGCTCAGTGCTTCACATTTCGTGGGAGGATATATAACAATGCAAGTGACATTGATGCTGGATTTGCTAGAACCCGCCAACGTGGTTGTCCATCTTCCAGTAGCCCTGACAACAATAAGAAGCTGGCAGCACTAGACTTGGTCACACCCAATTCGTTTGACAATAACTACTTCAAGAACTTAAGTCAGAAGAAAGGTCTTCTTCAATCAGATCAAGTTCTATTTAGTGGAGGATCTACAAATTCTATTGTGACCGAATATAGCAAAAATCCTACGACATTTAAGTCTGAGTTTGCAGCTGCTATGATAAAGATGGGAGATATTGAACCGTTAACCGGCTCAGCTGGGATAATAAGAAGGATTTGCAGTGCTATCAACTAA 993 0.427 MAYRISSITSFVVITLVLLGTISTCDAQLSSTFYDSTCPNALSTIRTVIRTSVSKERRMAASLIRLHFHDCFVQLIDLQGCDASILLDDSSTIESEKSALPNVNSVRGFEVIDKAKAEVEKVCPGVVSCADIVAVAARDASFAVGGPSWTVKLGRRDSTTASKSLANNDLPLFTDDLETLISRFDKKGLSARDMVTLSGAHTIGQAQCFTFRGRIYNNASDIDAGFARTRQRGCPSSSSPDNNKKLAALDLVTPNSFDNNYFKNLSQKKGLLQSDQVLFSGGSTNSIVTEYSKNPTTFKSEFAAAMIKMGDIEPLTGSAGIIRRICSAIN. 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00583 330 PANTHER PEROXIDASE 72-RELATED 26 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00583 330 ProSiteProfiles Plant heme peroxidase family profile. 28 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00583 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Seca5g00583 330 FunFam Peroxidase 32 181 - -
Seca5g00583 330 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00583 330 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00583 330 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00583 330 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00583 330 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00583 330 Gene3D Peroxidase, domain 2 171 309 - -
Seca5g00583 330 Pfam Peroxidase 46 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00583 330 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00583 330 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00583 330 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00583 330 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00583 330 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00583 330 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00583 330 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00583 330 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00583 330 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00583 330 SUPERFAMILY Heme-dependent peroxidases 28 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca5g00583 330 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Seca5g00583 330 FunFam Peroxidase 171 309 - -
Seca5g00583 330 CDD secretory_peroxidase 28 329 IPR033905 GO:0004601|GO:0042744
Seca5g00583 330 Gene3D - 32 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00583 Seca-Chr5 13539203 13540795 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00583 11 330 Peroxidase AT1G14550 67.702 1.30e-156 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00583 K00430 - gmx:100811641 555.058