Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00573 ATGGCTTATAGAATTTCAAGTATCACTAGTTTTGTTGTCATCACGTTGGTGTTGTTAGGCACCATATCAATATGTGATGCACAATTGTCTTCTACGTTTTATGATAGTACATGTCCGAACGCACTAAGCACTATTAGAACTGTGATTCGTACTTCAGTTTCTAAGGAGCGTCGCATGGCGGCGTCTCTCATTCGCCTTCACTTTCATGATTGCTTTGTTCAGGGTTGTGATGCATCGATTTTGCTTGATGATAGCGGCAGTATCGAGAGCGAAAAGAGTGCACGTCCGAATTTAAATTCAGTGAGGGGATTTGAAGTGATTGATCAAGCGAAATCAGAGGTCGAGAAAGTATGCCCTGGCGTTGTGTCATGTGCAGACATCGTAGCAGTAGCAGCGCGTGATGCATTTAATCAGGTGGGTGGTCCATCATGGACTGTGAAGCTTGGACGGAGAGACTCCACCACATCAAGCAAGAGTTTGGCTAACAGTGATCTTCCATTATTTACTGATGATCTTGAAACTCTTATAACTCGTTTTAGTAAGAAAGGGCTCAGCGCCAGAGACATGGTTACTCTATCTGGTGCCCACACAATTGGACAAGCTCAATGCTCCACATTCCGTGGCAGGATATACAACAATGGTAGTGACATAGATGCTGGATTTGCGAGCACTCGCCAACGTGGTTGTCCATCCTCAAGTAGCCCTGACAACGATAAGAAGTTGGCAGCACTAGACTTGGTTACCCCAAATTCTTTTGACAATAACTACTTCAACAACTTAATTCAGAAGAAGGGTCTTCTTCAATCAGATCAAGTTCTATTTAGTGGAGGATCTACAGATTCTATTGTGACTGAATATAGTAATAATCCCACAACATTTAAGTCCGACTTTGCAGCTGCTATGATAAAGATGGGAGATATTGAACCGTTAACCGGCTCAGCTGGGGTGATAAGAACGATATGCAGTGCTGTCAACTAA 978 0.4315 MAYRISSITSFVVITLVLLGTISICDAQLSSTFYDSTCPNALSTIRTVIRTSVSKERRMAASLIRLHFHDCFVQGCDASILLDDSGSIESEKSARPNLNSVRGFEVIDQAKSEVEKVCPGVVSCADIVAVAARDAFNQVGGPSWTVKLGRRDSTTSSKSLANSDLPLFTDDLETLITRFSKKGLSARDMVTLSGAHTIGQAQCSTFRGRIYNNGSDIDAGFASTRQRGCPSSSSPDNDKKLAALDLVTPNSFDNNYFNNLIQKKGLLQSDQVLFSGGSTDSIVTEYSNNPTTFKSDFAAAMIKMGDIEPLTGSAGVIRTICSAVN. 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00573 325 Gene3D - 32 325 - -
Seca5g00573 325 SUPERFAMILY Heme-dependent peroxidases 28 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca5g00573 325 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00573 325 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00573 325 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00573 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00573 325 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00573 325 FunFam Peroxidase 166 304 - -
Seca5g00573 325 PANTHER PEROXIDASE 72-RELATED 25 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00573 325 ProSiteProfiles Plant heme peroxidase family profile. 28 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00573 325 Gene3D Peroxidase, domain 2 166 304 - -
Seca5g00573 325 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00573 325 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00573 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00573 325 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00573 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00573 325 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00573 325 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00573 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00573 325 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00573 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Seca5g00573 325 FunFam Peroxidase 32 174 - -
Seca5g00573 325 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Seca5g00573 325 CDD secretory_peroxidase 28 324 IPR033905 GO:0004601|GO:0042744
Seca5g00573 325 Pfam Peroxidase 46 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00573 Seca-Chr5 13124557 13126728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00573 11 325 Peroxidase AT1G14550 68.454 2.73e-157 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00573 K00430 - gmx:100786161 547.354