Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00572 ATGGCGTATAGAATTTCAAGTATCACTAGTTTTGTTGTCATCACGTTGGTTCTGTTAGGCACAATATCAATATGTGATGCACAATTGTCTTCTACGTTTTATGAGAGCACATGCCCTAAGGCACTAAACACTATCAGAACTGTGATTCGTACTTCAGTTTCTAAAGAGCGTCGCATGGCTGCGTCTCTTATTCGCCTTCACTTTCATGATTGTTTTGTTCAGATAGAATGGAATCTGAAACAATTATATTGGGAATTAATTATATCTAATTTGATTGATTTGCAGGGTTGTGATGCATCAATATTGCTTGATGATAGCTCTACCATTGAGAGCGAAAAGAGTGCACTTCCGAATGTAAATTCAGTGAGGGGATATGAAGTCATTGATAAAGCAAAAGCTGAGGTTGAGAAACTATGCCCTGGCGTTGTCTCATGTGCTGACATCGTCGCAGTAGCAGCGCGTGATGCATCATTCGCAGTGGGTGGTCCATCATGGACGAGCAAGCTTGGACGGAGAGACTCCACCGCCGCAAGCAAAAGTTTAGCTAATAGTGACCTTCCATTATTTACGGATGATCTTGAAACTCTTATATCTCGTTTTGATAAGAAAGGACTCAGCGCCAGAGACATGGTTACTCTATCTGGTGCCCATACAATTGGACAAGCCCAGTGCTTCACATTTCGTGGGAGGATATATAACAATGCAAGTGACATTGATGCTGGATTTGCTAGAACCCGTCAACGTGGTTGTCCATCCTCCAGTAGCCCTGACAACAATAAGAAGCTGGCAGCACTAGACTTGGTTACACCAAATTCTTTTGACAATAACTACTTCAAGAACTTAATTCAGAAGAAGGGTCTTCTTCAATCAGATCAAGTTCTCTTTAGTGGAGGATCTACAGATTCTATTGTTACCGAATATAGCAAAAATCCTACCACATTTAAGTCTGAGTTTGCAGCTGCTATGATTAACATGGGAGATATTGAACTGCTAACTGGGTCAGTTGGGATAATAAGAAGGATTTGCAGTGCTATCAACTAA 1041 0.4102 MAYRISSITSFVVITLVLLGTISICDAQLSSTFYESTCPKALNTIRTVIRTSVSKERRMAASLIRLHFHDCFVQIEWNLKQLYWELIISNLIDLQGCDASILLDDSSTIESEKSALPNVNSVRGYEVIDKAKAEVEKLCPGVVSCADIVAVAARDASFAVGGPSWTSKLGRRDSTAASKSLANSDLPLFTDDLETLISRFDKKGLSARDMVTLSGAHTIGQAQCFTFRGRIYNNASDIDAGFARTRQRGCPSSSSPDNNKKLAALDLVTPNSFDNNYFKNLIQKKGLLQSDQVLFSGGSTDSIVTEYSKNPTTFKSEFAAAMINMGDIELLTGSVGIIRRICSAIN. 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00572 346 FunFam Peroxidase 187 325 - -
Seca5g00572 346 PRINTS Plant peroxidase signature 280 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00572 346 PRINTS Plant peroxidase signature 320 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00572 346 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00572 346 PRINTS Plant peroxidase signature 123 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00572 346 PRINTS Plant peroxidase signature 161 176 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00572 346 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00572 346 PRINTS Plant peroxidase signature 142 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00572 346 PRINTS Plant peroxidase signature 264 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00572 346 PRINTS Plant peroxidase signature 208 220 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00572 346 Pfam Peroxidase 46 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00572 346 SUPERFAMILY Heme-dependent peroxidases 28 346 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca5g00572 346 FunFam Peroxidase 32 199 - -
Seca5g00572 346 Gene3D Peroxidase, domain 2 187 325 - -
Seca5g00572 346 ProSitePatterns Peroxidases proximal heme-ligand signature. 209 219 IPR019793 -
Seca5g00572 346 CDD secretory_peroxidase 28 345 IPR033905 GO:0004601|GO:0042744
Seca5g00572 346 PANTHER PEROXIDASE 72-RELATED 25 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00572 346 ProSiteProfiles Plant heme peroxidase family profile. 28 346 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00572 346 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Seca5g00572 346 PRINTS Haem peroxidase superfamily signature 209 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00572 346 PRINTS Haem peroxidase superfamily signature 266 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00572 346 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00572 346 Gene3D - 32 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00572 Seca-Chr5 13110874 13113437 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00572 11 346 Peroxidase AT1G14550 63.314 2.45e-150 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00572 K00430 - gmx:100811641 536.954