Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00555 ATGCATTTCCACATTCCCTATCACTGCAACACCATGACCAAACCAAGCAATCTCAATCTCACCTCCTCCTCCTCCTCCTACTACTACCACCTTGGAGCCACCAGAAACTTCTATTCTCTTAGCCTCTTCCTCCTCCAAGACATCCAATTTTTTGAGATTCTCATTGCAATTTCTGTCTTCATAGTCATTCATTCCCTTAGACAAAAGAAGCATCATGGCCTCCCCATTTGGCCTATTCTTGGAATGTTACCTTCTTTGGTCTCAGGACTCAGAACCAACATGTATGAATGGATCACAGATGTTCTTAACAGAAAAAATGGCACTTTTAGATTCAAAGGGCCATGGTTTAGCAGCCTCAACAGCATTGTCACCTCTGATCCTCGCAACATAGAGCATCTTCTCAAAACCAAATTCTCTGTCTTTCCTAAAGGAAGTTTCTTTAGAAACACAGTAAGAGACTTACTTGGAGATGGCATATTCAATGCAGATGATGAGACATGGCAAAAGCAAAGGAAAACAGCAAGCCTTGAGTTCCATTCAACAAAGTTTAGAAAATTAACAACTGAGTCCTTATTGGAACTTGTCCATTCAAGGCTCTTACCTGTGTTAGAATCATCAGTTAAGAAATCTGTTGCAATAGACCTTCAAGACATTCTATTAAGGCTAACTTTTGATAATGTGTGCATGATAGCCTTTGGTGTTGATCCTGGTTGTTTGCAACTTGGATTGCCTGAGATACCCTTTGCAAGAGCCTTTGAGGATGCAACAGAAGCCACACTGCTTCGTTTTGTTACCCCAACTTTCATATGGAAAGCCATGAGGTTTCTCAACTTGGGGATGGAAAAGAAGCTGAAGGAATCAATAAAAGGGGTTGATGAGTTTGCTGAGAGTGTTATTAGGACTAGAAAGAAAGAACTCTCTTTGCAATTTGAGGAGAAGAAGCAAAAATCAGACTTATTAACTGTGTTTATGAAGATGAAGGATGAGAATGGAAAACCATATTCAGATAAGTTCTTGAGGGATATTTGTGTGAACTTCATATTAGCAGGGAGGGACACTTCTTCAGTAGCTTTGAGTTGGTTTTTTTGGTTGCTTGATAAGAATCCTGTGGTGGAGGAGAAGATAGTAGCAGAGATATGCAGGGTAGTGAGTCAGAGGGAAGGGATAAAGAAGGAAGAATTTGAGAATTCATTGACATTTAGGCCAGAGGAGATTAAAAAGATGGATTATTTGCATGCTGCTTTGTCAGAAGCTCTGAGATTATACCCTTCTGTGCCTGTGGATCACAAGGAGGTAGTTGAAGATGATACTTTCCCAGATGGAACAATGCTAAAGAAAGGGACTAAAGTTATATATGCAATTTATGCAATGGGAAGAATGGAAGGCGTATGGGGTAAGGACTGCAGGGAGTTCAAGCCAGAGAGATGGTTAAGAGATGGCCGTTTCATGAGTGAGTCTGCCTACAAATTCACTGCCTTCAATGGTGGACCTCGCCTATGCTTAGGCAAAGATTTTGCATATTACCAAATGAAATATGTTGCAGCAAGTATCATATACCGTTACCATGTGAAGGTGGTAGAGAACCACCCTGTGGTGCCAAAGCTTGCTTTAACTATGTACATGAAGCATGGATTGAGAGTTAACCTCTACAAGAGGGATGCTATGGAAATTCAAATGCATTTGGAAGATTGGTTAAAATGA 1701 0.4056 MHFHIPYHCNTMTKPSNLNLTSSSSSYYYHLGATRNFYSLSLFLLQDIQFFEILIAISVFIVIHSLRQKKHHGLPIWPILGMLPSLVSGLRTNMYEWITDVLNRKNGTFRFKGPWFSSLNSIVTSDPRNIEHLLKTKFSVFPKGSFFRNTVRDLLGDGIFNADDETWQKQRKTASLEFHSTKFRKLTTESLLELVHSRLLPVLESSVKKSVAIDLQDILLRLTFDNVCMIAFGVDPGCLQLGLPEIPFARAFEDATEATLLRFVTPTFIWKAMRFLNLGMEKKLKESIKGVDEFAESVIRTRKKELSLQFEEKKQKSDLLTVFMKMKDENGKPYSDKFLRDICVNFILAGRDTSSVALSWFFWLLDKNPVVEEKIVAEICRVVSQREGIKKEEFENSLTFRPEEIKKMDYLHAALSEALRLYPSVPVDHKEVVEDDTFPDGTMLKKGTKVIYAIYAMGRMEGVWGKDCREFKPERWLRDGRFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYVAASIIYRYHVKVVENHPVVPKLALTMYMKHGLRVNLYKRDAMEIQMHLEDWLK. 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00555 566 FunFam Cytochrome P450 65 555 - -
Seca5g00555 566 PANTHER CYTOCHROME P450 63 546 - -
Seca5g00555 566 PRINTS P450 superfamily signature 500 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00555 566 PRINTS P450 superfamily signature 491 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00555 566 PRINTS P450 superfamily signature 349 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00555 566 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00555 566 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 493 502 IPR017972 GO:0005506|GO:0016705
Seca5g00555 566 PRINTS E-class P450 group I signature 500 523 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00555 566 PRINTS E-class P450 group I signature 412 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00555 566 PRINTS E-class P450 group I signature 338 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00555 566 PRINTS E-class P450 group I signature 358 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00555 566 PRINTS E-class P450 group I signature 490 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00555 566 CDD CYP86A 109 545 - -
Seca5g00555 566 Pfam Cytochrome P450 74 537 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00555 566 Gene3D Cytochrome P450 68 563 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00555 566 SUPERFAMILY Cytochrome P450 73 552 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00555 Seca-Chr5 12597543 12601098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00555 39 560 Cytochrome P450 AT5G23190 75.048 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00555 K15402 - gmx:100809503 958.747