Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00515 ATGTACTTCTGTCAAAGGGGTAGCCCTCCACTCCAATCAGTTGCAGCAGAGACTACAGTTGGAAGAAATGGCTCAAGTGATATTGACCTGAATAATGTATATGATGATGTGCAGGATTATGTTGAGAACCCCAGGAATTCTCATCCTCCTTTGACTTCAGGGATTGGGCCTCTTGATCATCCTTCATGGGTACAATGTGACTCTCTCAAGTCAAGTCCACCACAGACTAATATTCTGATTCTTAAAAATATAGCCAAGGGTGCCACTGCTATGAATGAAAGAAGTAGTCGTTCTCACAGTGTGGTTTCAATTCATGTCCGTGGGGCGGATAAGAAATCTGGTTCTTCTCTTCAAGGTAATCTTCATTTGATAGATTTGGCAGGAAGTGAAAGGGTAGATCGCTCTGAAGTAACTGGGGATAGACTCAAGGAAGCACAGTATATTAACAAATCACTATCTGCACTTGGAGATGTCATTTTTCCCTTTCTCAAAAGAGTGCCCATGTACCATACAGAAACAACAAGCTTACTCAACTTTTGCAAACATCACTTGGTGGCTTCTCTGAAGGATACTATTTTGACAAAAGATGAGGAGATTGAGCGGCTACAATTACTTGAGGATCTGAAAAATGTTCAGCCCAATGTCAATTCTGAGAAGCTTGAAACAGCCACCGATTGA 678 0.4159 MYFCQRGSPPLQSVAAETTVGRNGSSDIDLNNVYDDVQDYVENPRNSHPPLTSGIGPLDHPSWVQCDSLKSSPPQTNILILKNIAKGATAMNERSSRSHSVVSIHVRGADKKSGSSLQGNLHLIDLAGSERVDRSEVTGDRLKEAQYINKSLSALGDVIFPFLKRVPMYHTETTSLLNFCKHHLVASLKDTILTKDEEIERLQLLEDLKNVQPNVNSEKLETATD. 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00515 225 PRINTS Kinesin heavy chain signature 120 138 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca5g00515 225 PRINTS Kinesin heavy chain signature 89 106 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca5g00515 225 Pfam Kinesin motor domain 83 165 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca5g00515 225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 200 IPR027417 -
Seca5g00515 225 ProSiteProfiles Kinesin motor domain profile. 81 225 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca5g00515 225 PANTHER KINESIN-LIKE PROTEIN KLP-3 82 160 IPR027640 GO:0003777|GO:0007018
Seca5g00515 225 Gene3D Kinesin motor domain 76 224 IPR036961 -
Seca5g00515 225 SMART kinesin_4 4 217 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00515 Seca-Chr5 11907360 11908962 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00515 88 159 Calmodulin-binding Proteins AT5G65930 56.944 1.20e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00515 K10406 - aew:130766704 155.992