Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00493 ATGATTAGTACCAAGAAAATGATCCAAATAGCTAGAAAGTGGCAGAAACATGCCACAAAGCAAAGGAAGAGAATCCTGTGGCGAAAGAGTGATCAAGAAAATGAAGCAAAACAAGAAGGTTATTACAATTTATGTACGAAGGCAGAGAAGGGTCATTTTGTTGTGTACAGCGTGGATAAGAGGCGCTTTGTGCTTCCTTTGGTGTATTTGAAAAACAACATCTTCAGAGAGCTCTTCGAATTAGCAGAAGAAGAGTTTGGTTTGTCTTACAATGTGCCCCTTGTGTTGCCTTGTGATGGCACAGTAATAAAATATGTAATTACGTTGATAGAGGGAAACGTGGCTAAGGATCTGGAGGAAGCTGTGTTAATGTCCATAACTACACGTCGATGTCAATCATATTTGAATCTTCATCAAGAACGAACCAATCAACATGTGCTCTGCAGTTTCTGA 453 0.3951 MISTKKMIQIARKWQKHATKQRKRILWRKSDQENEAKQEGYYNLCTKAEKGHFVVYSVDKRRFVLPLVYLKNNIFRELFELAEEEFGLSYNVPLVLPCDGTVIKYVITLIEGNVAKDLEEAVLMSITTRRCQSYLNLHQERTNQHVLCSF. 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00493 150 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 144 IPR003676 GO:0009733
Seca5g00493 150 Pfam Auxin responsive protein 12 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00493 Seca-Chr5 10799340 10799792 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00493 23 118 Calmodulin-binding Proteins AT5G20810 37.000 1.58e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00493 - - adu:107477309 187.193