Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00489 ATGGAAAAAGGTTGTGAGGAATTGTCAAACGGTGATGGTAATAGTAGTACCAATGAAGTATGTGGTGGTGTTGAGGCATGTGAGGGACCTAAAAATGTTACTGAGTTGACAGTTGATGAGATTATGGCTCTTGAATTTGATTCAGAGGAAGATGCTTTTAATTTTTATACTAATTATGCTAAAGTAGTTGGGTTTTCAGTAAGAAAAGATGACGTCTATCGTGATGATCGGTATGGGATTGTTATGAGAAACATGGTATGTAATAGGCAAGGAGAGAGGTCTGAGAAGAACATGCAAAGGAAGGACAGGTGTCGTGAACCAAGGGCCATTACTCGCACACGTTGCCAAGCAAGGCTCCGTGTTCGTTTAGGTTACTTGAGTGGAAAATGGACAGTTACTCATTTTAAGCCCAATCATAATCACGAGTTGACCCCATCAACATATGTCCATTTGATTTCTACATACAGAGGTCTTTCTGAGGGTGATAAGGCTCAAGCAAAAGCTGATAATGACCCGATGGTGTTCACAGAATTTACTATTACAGATGATGGAAATCTTAAGAATCTGTTTTGGATTGATGCAAGTAGTAGGATTGATTATCACTGTTTCGGGGATGTAGTGGCTTTTGACACAACTTACAAGAAGAATAAGTATAATAAGCCATCGGTTATTTTTTGTGGTTATAATCATCATGGTGAAACAACAAGGTTGTGCCTTGATTGTTGA 726 0.3884 MEKGCEELSNGDGNSSTNEVCGGVEACEGPKNVTELTVDEIMALEFDSEEDAFNFYTNYAKVVGFSVRKDDVYRDDRYGIVMRNMVCNRQGERSEKNMQRKDRCREPRAITRTRCQARLRVRLGYLSGKWTVTHFKPNHNHELTPSTYVHLISTYRGLSEGDKAQAKADNDPMVFTEFTITDDGNLKNLFWIDASSRIDYHCFGDVVAFDTTYKKNKYNKPSVIFCGYNHHGETTRLCLDC. 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00489 241 MobiDBLite consensus disorder prediction 1 21 - -
Seca5g00489 241 Pfam FAR1 DNA-binding domain 54 144 IPR004330 -
Seca5g00489 241 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 42 235 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00489 Seca-Chr5 10681634 10682540 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca5g00489 FAR1 1.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00489 - - ahf:112723022 189.504