Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00410 ATGGAAGAAACTGGCTTGCTGTGGCTGATATCCACTACCATATTTGTCCTCTTGTTTCTTTTTCTTTCTAACTACTTCTTCTTCATACAAACCAACAAACACAGAAACCTGCCACCTAGCCCACCCGCTTTACCCTTCATAGGACACCTTCATCTCTTAAAACAACCTCTCCACCGAACTCTCCACAATCTCACTCACAACTATGGCCACATATTTCTCCTCCGTTTCGGAATCCGAAACGTCGTCGTCGTTTCATCACCCTCTGCCGTAGAACAATGCTTCACCAAAAACGACATCACTTTCGCAAACCGTCCCCACACGCTTGCCGGGAAGCACCTCAATTACGATCACAAAACGGTTGGATTCGCTTCCTACGGCCATCACTGGCGCAACCTCCGCCGTCTGATGACCGTTGAGCTTTTATCCACCAAACGACTCGACATGTTCGCGAGAATTCGAGAGGAAGAGATCCAGCTGTTGGTGAAACAACTCTTTGAAGAAAGCAAAGGTGGACACGTGTCAAGAGTAGACGTAAGGTCGATGCTTGTGGAGGTTTCATTCAACATCATGTTGAGGATGATATCTGGGAAACGGTATTATGGGAAGGATGTGGTGGCTAAAGAAGGGAAGGAGTTTCAGTTTTTGATGAAAGAGTTTGCGGAGCTTGTTGGGAATGGGAATTTGAATGACTTTTTGCCGATACTGCGATGGGTTGATTTTCAAGGATTGGAAAAGAGGATGGTGAAGGTTATGAAGAAGGCGGATAGCTTCTTTGAGAATCTTCTTGATGAGCACAGGAGAAATAGGAGAGGAAACTACCAGCACCAGGAGAGGAAGATGACTCTGATTGATGCTATGTTGGATCTGCAAGAAAACGAACCGGAATTCTACACCAATGAAACTATTAAAGGCGTTATTCTGGGTCTATCTTTTTTTTGTTTACATGCTTGTGTACACTCTATCCGTGTTATTTGTGTAATGCTTATTGGTGGGACTGAAACTTCGGCTACTACCTTAGAATGGGCACTGACACTTCTTCTCAACAATCCAGAAGCAATGAATAAGACAAAAGTTGAGATAGACAATAATGTAGGGCAAGATCATCTATTGAATGAAATGGACACAAGGAAACTCAAATATTTGCATAATGTAATTACTGAGACACTTCGTCTCTACCCTGTGGCTCCACTCTTGATCCCTCACGAGTCCTCCAATGATTGCAATGTTTGTGGTTTTGATATACCACGAGGGTCAATGCTACTTGTGAATCTATGGACCCTACATAGGGACCCTAAGTGGTGGGTAGATCCTACAAGGTTTGAGCCAGAAAGATTTGAGGAAGGTGAAAGTAGTGTTGGAGAAGAAGTGCTCTACAATATGATTCCATTTGGAATTGGAAGGCGAGGTTGCCCGGGAACTGCTTTGGCAAAACGTGTTATGGGACATGCATTGGGTGCCATAATTCAATCTTTTGAGTGGGACAAAATTGGGAATGAAGAAATTGACATGATTGAAGGATCAGGGCTTACCATACCCAAACTTGAACCTTTGGTGGCCTTTTGCAAGCCACGCCAAGGCATGATCAAGGTTCTATCGGATATATAA 1605 0.438 MEETGLLWLISTTIFVLLFLFLSNYFFFIQTNKHRNLPPSPPALPFIGHLHLLKQPLHRTLHNLTHNYGHIFLLRFGIRNVVVVSSPSAVEQCFTKNDITFANRPHTLAGKHLNYDHKTVGFASYGHHWRNLRRLMTVELLSTKRLDMFARIREEEIQLLVKQLFEESKGGHVSRVDVRSMLVEVSFNIMLRMISGKRYYGKDVVAKEGKEFQFLMKEFAELVGNGNLNDFLPILRWVDFQGLEKRMVKVMKKADSFFENLLDEHRRNRRGNYQHQERKMTLIDAMLDLQENEPEFYTNETIKGVILGLSFFCLHACVHSIRVICVMLIGGTETSATTLEWALTLLLNNPEAMNKTKVEIDNNVGQDHLLNEMDTRKLKYLHNVITETLRLYPVAPLLIPHESSNDCNVCGFDIPRGSMLLVNLWTLHRDPKWWVDPTRFEPERFEEGESSVGEEVLYNMIPFGIGRRGCPGTALAKRVMGHALGAIIQSFEWDKIGNEEIDMIEGSGLTIPKLEPLVAFCKPRQGMIKVLSDI. 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00410 534 PANTHER CYTOCHROME P450 82C3-RELATED 16 524 - -
Seca5g00410 534 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00410 534 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00410 534 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00410 534 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00410 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Seca5g00410 534 SUPERFAMILY Cytochrome P450 38 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00410 534 CDD CYP81 69 517 - -
Seca5g00410 534 Gene3D Cytochrome P450 29 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00410 534 Pfam Cytochrome P450 38 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00410 534 Pfam Cytochrome P450 324 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00410 534 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00410 534 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00410 534 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00410 534 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00410 534 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00410 534 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00410 534 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00410 534 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00410 534 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00410 534 FunFam Cytochrome P450 family protein 28 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00410 Seca-Chr5 8853945 8862016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00410 12 533 Cytochrome P450 AT4G37370 45.351 8.65e-160 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00410 - - gmx:100794610 671.389