Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00386 ATGGCATTTGTCTTCCGGAATATATTCTCAAAGAAAGGGATGAAGGGGATGTCAGTTAGTGAAATGAACTATTATGCTTGCCTTTCCATATTGTCTCTATTAATTCTCACACCTTTTGCCATTGTTGTGGAGGGTCCCATGGTGTGGGTTGCAGGATGGCAAACAGTTGTGTCTCAGATTGGCCCCAATTTTGTATGGTGGGTGGCTGCCCAGAGTGTCATCTACCACTTGTATAATCAAGTCTCTTACATGTCCCTTAATCAGATTTCTCCCTTAACATTTAGCATAGGGAACACAATGAAGAGAAATTCTGTAATTGTTTCTTTTATCTTTATCTTTCACACGCCAGTTCAACCCATAAATGCTCTTGGGGCCACCATTGCAATTCTTGGCACCTTTCCTACAGGTGCATTCCACTTTCCTTCTAAATGA 432 0.4144 MAFVFRNIFSKKGMKGMSVSEMNYYACLSILSLLILTPFAIVVEGPMVWVAGWQTVVSQIGPNFVWWVAAQSVIYHLYNQVSYMSLNQISPLTFSIGNTMKRNSVIVSFIFIFHTPVQPINALGATIAILGTFPTGAFHFPSK. 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00386 143 PANTHER SOLUTE CARRIER FAMILY 35 2 133 - -
Seca5g00386 143 Pfam Triose-phosphate Transporter family 1 133 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00386 Seca-Chr5 8314606 8317806 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00386 1 133 Antiporters AT1G61800 81.203 3.55e-71 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00386 K15283 K05350 gmx:100790658 244.202