Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00363 ATGCACAAAAACAGAGTTTTCATCAAGAATGGGAAGCTTGAGATTGATTCTGAGTCAGCAGCATTTGAGGTCAATGAAACAGAATCAGTTCTATCAAAGTCAGATATTAATAATAATAAGTACACTTCAATCAAGGCAAAGTTTTTGGATTCTGAAACCAAGTCAAGTTCTTTGAAGAACAAGAACTTTCATAAGAGAGGCAAGTTTGAGTGTACTACTTGCAACAAAATCTTCCACTCCTACCAAGCTCTTGGAGGTCATAGAGCTAGTCACAAGAAGATCAAAGGTTGCTTTGCTTCAAGGAATGAAAGCAGTGAGAACAACATTGAATTGGAACCAGACCTCTCCCCTGACCCAACAACAATAGAAAGTAATAAGCTCATGAAGAACACTGACAACAATGAGTATCTAGAGGAAGAGCATGAACTAGGTGGTCACAAGAGATCCCATTTGGCTAGTGAATCTGAGAGTAGACACTGTCAAAGTCAAACAGTGGTGCTTCAGGAAGCAGTTCCAGAAATAAGGAACTTCCTTGATCTTAATCTTCCAGCTGCTACAGATGAAGAAAGCAATAGTCATGCTGAGCCTTACAGACCTTGGTGGGTAGTAGGAAGCAACCACAAGCAAGAGGCACTGGTAGGCCTCATGTCTAACTGA 657 0.4064 MHKNRVFIKNGKLEIDSESAAFEVNETESVLSKSDINNNKYTSIKAKFLDSETKSSSLKNKNFHKRGKFECTTCNKIFHSYQALGGHRASHKKIKGCFASRNESSENNIELEPDLSPDPTTIESNKLMKNTDNNEYLEEEHELGGHKRSHLASESESRHCQSQTVVLQEAVPEIRNFLDLNLPAATDEESNSHAEPYRPWWVVGSNHKQEALVGLMSN. 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00363 218 MobiDBLite consensus disorder prediction 140 160 - -
Seca5g00363 218 ProSitePatterns Zinc finger C2H2 type domain signature. 71 91 IPR013087 -
Seca5g00363 218 ProSiteProfiles Zinc finger C2H2 type domain profile. 69 96 IPR013087 -
Seca5g00363 218 PANTHER OS02G0659100 PROTEIN 22 117 - -
Seca5g00363 218 MobiDBLite consensus disorder prediction 140 155 - -
Seca5g00363 218 Pfam C2H2-type zinc finger 69 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00363 Seca-Chr5 7711143 7711906 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00363 50 192 C2H2 Transcription Factor Family AT2G45120 37.500 9.27e-19 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00363 - - aprc:113852386 264.618