Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00362 ATGGAGTTCCTAAGTTGTATTCTTCTCCTTGCCTTCACATTCACTCTGTTTTCTCTGCTTTCAAGAAGCAACAAACCCAACTACAAGCTCCCACCAGGACCTTCCCCACTTCCCATCATGGGAAACCTCCTTTCATTGGGAAAAAAGCCCCACCAGTCCTTAGCAAATCTAGCTAACATTCATGGCCCAATCATGAGTCTAAAGCTAGGCCAAGTAACCACCATAGTGATCTCTTCAGCTGAAATGGCCAAAGAGGTGCTCCTAACCCATGACCAATTCCTATCAAACAGAGTCATTCCCCAAGCTGTGCAAGTTCACAATCACCACAAACATAGCATCACATTCTTGCCTATCTCACCTCTCTGGAGAGACCTAAGAAAAATGTGCAATAATCAATTATTCTCCCACAAGTCTCTGGATACAAGTCAAGACCTGAGGCATAAGAAACTGCAACAACTCCTCAATGATATGCATCAAAGCAGCTTGGTAGGTGAAGCAGTGGATATTGGAAAGGCAGCATTCAAGACTGCAATTAATTTGTTATCAAACACTATGTTCTCTGTGGATTTGGTTCACTCTGCAGGTTCAGCTGGAGATTTCAAGGAGTTAGTGGTGAATATCAATGAAGAATGTGGGAAACCAAACTTGGCTGATTTCTTTCCAGCTCTGAAGATGGTTGATCCACAAGGCATCAAAAGTCGCAACACTAGTTATGCTGGAAAGGTCATAGACATCTTCACCCGTTTGGTTGATCAAAGATTGAAGCTCAGGGAAGTCCAAGGCTTTGACACAAACAATGACATGCTAAATACCTTGCTCAATATTGCTCAGGAGAATGGCCAAGTGATGAACAAAACCAAGATTGAGCATTTATCTCTGACTATATTTGTTGCTGGAACGGATACAATTATATCTACTCTGGAATGGGCAATGGCAGAGTTACTTAAAAATGAAAAAGCTATGTCAAAAGCAAAACAAGAGCTGGAGCAAATAATTGGCAAAGGTAAACCTGTTGAGGAATCAGATGTTGCTAGGCTTCCTTATTTACAAGCAGTGATAAAAGAGACATTCAGATTGCACCCTCCAGTTCCATTTCTAATCCCTCGTAAAGCCAATGCAAATGTGGAGATTGGTGGCTACACAATCCCAAAAGATGCACATGTGTTAGTCAATGTGTGGGCTATTGGAAGAAATTCAAGTATATGGGAAAATGCAGATTTGTTTTCACCAGAGAGGTTCTTGAACTCAGAAATTGATGTCAAAGGTCACAATTATGAGCTTACACCATTTGGTGGTGGGCGTAGAATCTGTCCTGGCTTGCCATTAGCTATGAGGATGTTGTATTTGATGTTGGGTTCACTAATTAACTGTTTTAATTGGAAGCTTGAAGATGGGATGAAAATTCAGGACATGAACATGGAGGACCATTTTGGGATAACCTTAGCAAAGGCACAACCTGTGAGGGTTGTTCCAGAGAAAATAAACAATTGA 1491 0.4131 MEFLSCILLLAFTFTLFSLLSRSNKPNYKLPPGPSPLPIMGNLLSLGKKPHQSLANLANIHGPIMSLKLGQVTTIVISSAEMAKEVLLTHDQFLSNRVIPQAVQVHNHHKHSITFLPISPLWRDLRKMCNNQLFSHKSLDTSQDLRHKKLQQLLNDMHQSSLVGEAVDIGKAAFKTAINLLSNTMFSVDLVHSAGSAGDFKELVVNINEECGKPNLADFFPALKMVDPQGIKSRNTSYAGKVIDIFTRLVDQRLKLREVQGFDTNNDMLNTLLNIAQENGQVMNKTKIEHLSLTIFVAGTDTIISTLEWAMAELLKNEKAMSKAKQELEQIIGKGKPVEESDVARLPYLQAVIKETFRLHPPVPFLIPRKANANVEIGGYTIPKDAHVLVNVWAIGRNSSIWENADLFSPERFLNSEIDVKGHNYELTPFGGGRRICPGLPLAMRMLYLMLGSLINCFNWKLEDGMKIQDMNMEDHFGITLAKAQPVRVVPEKINN. 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00362 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Seca5g00362 496 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00362 496 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00362 496 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00362 496 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00362 496 Pfam Cytochrome P450 31 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00362 496 CDD CYP76-like 58 491 - -
Seca5g00362 496 Coils Coil 311 331 - -
Seca5g00362 496 Gene3D Cytochrome P450 17 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00362 496 SUPERFAMILY Cytochrome P450 31 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00362 496 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00362 496 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00362 496 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00362 496 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00362 496 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00362 496 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00362 496 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00362 496 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00362 496 FunFam Cytochrome P450 76C4 22 490 - -
Seca5g00362 496 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 6 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00362 Seca-Chr5 7634857 7636855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00362 3 493 Cytochrome P450 AT2G45550 45.161 4.67e-160 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00362 - - lja:Lj0g3v0208479.2 731.095