Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00356 ATGGTGACTCCTAATCCTAATTCAACATGTCCACCACCAATGAAGGCAACCTCAAACGGTGCCTTCCAACATGAAAACCCCATGGATTATGCACTTCCCCTATTAATCGCTCAGATATGTATCGTAGTGGCTTTCACCAGATTCATTGCATTCATTTGCAAGCCTCTCAGACAACCCAGAGTTATTGCAGAAATCATTGGAGGAATAGTACTTGGACCATCTGCAATTGGGAGGAGTAAGAAATTTTTGGATACATTTTTCCCAGAGAAAAGCTTAACTGTCCTTGAAACACTGGCCAATATTGGGCTTCTATTCTTCTTGTTTCTAGTGGGTCTTGAGCTTGACATGCGTTCAATACGCAAAACTGGTCCTAAGGCATTAGGCATTGCCCTTGCTGGAATCACACTCCCTTTTGTACTTGGAATTGGCACTTCACTTGCTCTTAGAGCCACCATATCAAAAGATGTTGATCCAGCCTCTTTCCTTGTCTTCATGGGTGTGTCTCTCTCAATCACTGCCTTTCCTGTCCTTGCTAGAATCCTTGCTGAGCTCAAACTCCTCACAACTGATGTTGGTCGCATGGCAATGTCAGCTGCTGCTGTCAATGATATTGCAGCTTGGATACTTCTTGCTCTTGCCATTGCTCTCTCTGGTTCCAACTCATCCCCACTTGTTTCTTTATGGGTCTTACTCTGTGGTGCTGGTTTTGTTGCCTTTGCTATCATTGCCATAAAACCTTTGCTTGTAATAATGGCTAAGCGTTCCCCTGAGGGTGAACCTGTGAAGGAGCTCTACATATGCATCACCTTGACATTAGTCTTGGCTTGTAGTTTTATCACTGATACTATTGGCATTCATGCACTCTTTGGGGCTTTTGTTGCTGGCATTGTTGTGCCTAAAGATGGTCCTTTTGCTGGAGTTTTGACTGAGAAGATGGAGGACCTTGTAATGAGCCTTTTCTTGCCACTATATTTTGTGTCTAGTGGTTTGAAGACTAATGTGGCAACTATAAGTGGAGCACTTTCTTGGGGTTTGTTAGTCCTTGTCATATTCACTGCTTGCTTTGGAAAGATCATTGGCACACTTGCTGTGTCAATGTTATGTAAGGTACCTTTTAGAGAAGCCCTGACCCTTGGATTTCTCATGAACACCAAGGGCTTGGTGGAGCTTATTGTTCTCAACATTGGCAAGGACCGCAAGGTACTGAATGATCAGACATTTGCAATTTGTGTTCTGATGGCACTGGTCACCACTTTCATCACCACCCCAATAGTGATGGCAGTGTATAAACCAGCTCGGAGGGGATCACCTTACACACACAAAACAATTCTGCGCAAAGATCCTGACACAGAGCTTAGGGTGCTGGCTTGCTTCCACAGTACCCGCAACATTCCAACATTGATCAATCTAATAGAGTCTTCCCGGGGAACCCGAAAGAGAGGAAAGCTATGCATATATGCCATGCATTTGATGGAACTCTCAGAGAGACCCTCAGCTATCTCAATGGTTCATAAGGCACGCAATAATGGCATGCCCTTTTGGAACAAAAAACAGGACAATGAAGATCGAATGGTCATTGCATTTCAGGCTTATGGACATCTAAGTAGTGTCAATGTTCGTCCCATGACAGCCATATCTTCTCTCAACAACATTCATGAGGACATATGTTCTAGTGCACACCAGAAGAGAGTAGCAATGATTCTCCTTCCATTCCACAAACACCAACGTGTTGATGGGACTATGGAGTCACTGGGACATGCATTCCGTGTAATGAATGGCCTTGTGCTTAGCCATGCTCCTTGCTCAGTGGGAATTTTGGTTGATCGTGGCCTTGGAGGGACAAGCCAAGTCCATGCCAGTGATGTGTCTTACAATGTTGCAGTAGCCTTCTTTGGAGGGTGTGATGACCGTGAAGCACTTGCTTATGGGATGAGAATGGCTGAGCACCCTGGAATTTTGCTCACTGTTATCAAGTTTACAGCTCCACCTGGGAAGACATTGGCCTTTGGTGCCAAATTGGTTGGTGTAACAGCCAATAAGGATACCAAGGTGATAGAAGTGGCTGATGGCTCTACCAATGATGGAGATAAACAAGAGGATGACCAATTTTGGTCTGAGTTTCTAACTGTGTGCTCCAAGAGTGAAGACTCCATAGTGTATGAGGAAAGGTTGGTGGAAAGCAAAGCAGATGTTGTAGCTGCATTGAAGGAAAAGAATAAGAGTAATCTAATTTTGGCAGGTAGAATGCCACCAGTAGCACCTTTGGTAGATAGAAGTGATTGCCCAGAGCTTGGTCCTATTGGAAGCTACTTGGCTTCTTCAGAGTTCTCCACTTCTGCATCAGTTATAGTGTTTCAGCAATATGATCCCAAAACAGACATCCACCCGTTGGTGATGGAGGTTTCAGATTACTCCAATATGCCAGACACACCATTGCATACTGTATAG 2448 0.444 MVTPNPNSTCPPPMKATSNGAFQHENPMDYALPLLIAQICIVVAFTRFIAFICKPLRQPRVIAEIIGGIVLGPSAIGRSKKFLDTFFPEKSLTVLETLANIGLLFFLFLVGLELDMRSIRKTGPKALGIALAGITLPFVLGIGTSLALRATISKDVDPASFLVFMGVSLSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDIAAWILLALAIALSGSNSSPLVSLWVLLCGAGFVAFAIIAIKPLLVIMAKRSPEGEPVKELYICITLTLVLACSFITDTIGIHALFGAFVAGIVVPKDGPFAGVLTEKMEDLVMSLFLPLYFVSSGLKTNVATISGALSWGLLVLVIFTACFGKIIGTLAVSMLCKVPFREALTLGFLMNTKGLVELIVLNIGKDRKVLNDQTFAICVLMALVTTFITTPIVMAVYKPARRGSPYTHKTILRKDPDTELRVLACFHSTRNIPTLINLIESSRGTRKRGKLCIYAMHLMELSERPSAISMVHKARNNGMPFWNKKQDNEDRMVIAFQAYGHLSSVNVRPMTAISSLNNIHEDICSSAHQKRVAMILLPFHKHQRVDGTMESLGHAFRVMNGLVLSHAPCSVGILVDRGLGGTSQVHASDVSYNVAVAFFGGCDDREALAYGMRMAEHPGILLTVIKFTAPPGKTLAFGAKLVGVTANKDTKVIEVADGSTNDGDKQEDDQFWSEFLTVCSKSEDSIVYEERLVESKADVVAALKEKNKSNLILAGRMPPVAPLVDRSDCPELGPIGSYLASSEFSTSASVIVFQQYDPKTDIHPLVMEVSDYSNMPDTPLHTV. 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00356 815 Gene3D - 34 436 IPR038770 -
Seca5g00356 815 FunFam Cation/H(+) antiporter 15 34 436 - -
Seca5g00356 815 Pfam Sodium/hydrogen exchanger family 41 424 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca5g00356 815 PANTHER CATION/H + ANTIPORTER 9 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00356 Seca-Chr5 7509457 7512644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00356 1 806 Antiporter Super Family AT3G17630 69.975 0.0 1118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00356 K26731 - gmx:100818975 1337.01