Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00303 ATGAGACTCGAATCAGGGACTTGTAACGTATGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCGAGCTTTCATGGGGTCGAAGGCTGAAGAATACTCTGATGAAAACTGTCGCTCAGGGGAGGCTAATCAGTATTCTACAGATGAGGGTGATGGATCTTCTCTTAGGAGCAGAGCTTGTGAGAGATCGAAGCATGCTGTCAGTGAAACCAGTAATATGCCTAGTGTTTATTCCAGTCATGATGATTCTCTATCTGAAAATGCCGAGAGTAAACAGGCCTTATTAGAAAAGTATCAGGATTCCAAGTGTTTGGAAGGTCTTGATGATAGCACTTCTTGTATCAGTAGAGCCAGCAAAGCTAATTTAGTGAGTGGTAACCATCAAATAAATTCAGACAGAATAAATATATCTTGTAGTTCAGCTTCAGCTAGTCACTTAGGGGCGGAATTATCTAGAATTGGGCCATCTGTTGACATGTCAGGCTCGTCTGAGATTCTCTCTTCTAAAGATGCAGATATTGTGGAAAATTTGTCAGAATGTTGTATGCAAAACGTTGAATCAGCATTGACCAAAGAGAGAGAACCTATTATTGTTACTGGTGAAAAATCTCCTGCAGATAACGATATATCGAAAATACATCCAAAGTCAGAAGCAGATACTGACAATGATGTTGGCGGTACTAAAGATGAGGATCATAAATATTCAGCCCATGATGGACTGCATGAGAAGGCTGAGGAGCTGGTTAAATCACCTAGCATGCCTGTACCTCAATCAGAAGATGAGAGTGATGAATCAGATGTTGTTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATTCTGGTCGTGATGATCTACTTGCCTTCTGTTGTAGGTGCAGTGATGGCGCAGAGCACACCTACTGCATGCGGGTAATGCTTGATAAGGTTCCTGAAGGGGACTGGTTATGTGAAGAATGCCAATATGCAGAAGAGACAGCAAATCAAAGGCTGGTTGTTGAAGGAAAAAAAAGTCATAAAGTTAGTTACACTTCGCAAATATCTGGAAAAAGGCCTTCTGAAAGCGTGGAAGTAGCTACAGCAGCAAAAAGGCAAGCTCTTGAATCCAGCTCAGGATCACCGAAGGCATCAAGCCCCAAGAGAATAGTTCCAGTGTCACGAGAATCTTCATCCAAGAGCTTAGATAATGGAAAAGTTAAACCTGGTCAACAGATCCCCATTCGTAATCGCCCTGGTGGTGATGGCGTAGAACTAGCTCGTTCTCTTTCCACTGGCCCTCGGAGTCAAACTGCAAGGGGTGCGTTGTTGAAGTCTAATTCATTCAACAGCTTCAATTCCAAGCCAAGAGTCAAACATGTTGATGAAGTTGTTCCCCAAAAGCAGAAAGGGGGTGTTGAACATATTTCTAAGAATATGGAGACACCTGCTGGGACGATAAGCAAATCAATGTCATTCAAATCCTCAAATTTAGGCCGTGCTACTGAATCAAAAGTTAAAATGCTTTCTCCCAAGTCTGTAACTGCTCAGGATTTGAAAGGATCAAGACATGCAAAAGAATCGGGTGTATCTGACAGGAAATTTCTGTCTAGGATTGATCGGCCTGTCATTTGTTCAACCATAGCTAGTTCTGTTGTTTCACCTAAGGGTGATCAAAAGCTCACGCCTCGTGGTGAAACTGCCAAACCTTCAGCAGTTAACAACAATCGAGAGCCTAAGGTCAACCAAGATGGAAAATTAAGTTCATTATCAAAGTCTATGAATAATATAAGCCATAAAAGTCTGGAACCTCAGGTTATTTCAGAGAGAACGTCAACCAGTGTGTATGAAAGTAAACAAGATGGGCTGCCTCGAGCACGAGAGACAGCAAATCAGGTTGACAAAACAAAAGATAGTTCTATTGATCGTGTGAGGTCAAGTGTTACTAATGCTTCAAAAAGCTCATTCTGTCATAAATGTAAAGATTTTGGCCACCCTACAGAATGTTGCACAATTGGTGGTACACAGGAATCTGGTGCTGAAGTATCAGTCACTGCCACAATTAGTTCAAAAGTGGAGATGCACACAGGTAATAAGTTGAAAGCTGCAATCCAGGCAGCTTTGCTTAGAAGACCTGAACTACACAAAAAGAAAGATGTGCCTGATCAAACTGATGAGTTTCCTACATCAGGCACAGACTTCAAATCTGCAGTCAGTTCTCAAGACCAAGTGTTGGTTTCCTACACATCAAAAAATAGTATATCTGCTGAAGAAACCAATGCAAGGCAGGAAATCCTTGAGAATTCTACGTTTGAAACTTGCAAACATTCATCTGGCAATGATTTGAAGCATAACTTTTGTCCAACTGATTTTTCTTTTCAACTGAGAAAGTCAGATTCTGAGGTTCCTGCTTCTGGAAAGCTTGGGGTGAGAGACTTGCCTCATCGTGCTTCGGCAATCTCAAGTGTTATTTCAAAGATGTCAGCCATTCCAGAATATGAATACATCTGGCAGGGTGTCTTTGAAGTGCATAGAAGTGGAAAGCCTCCTGACTTGTATACTGGAATTCAAGCACATTTATCCTCATGTGCTTCCCCTAAGGTTCTTGATGCAGTGAGCAAGTTTTTACCTGAAGTTTCCCTACACGAAGTTTCTCGCTTGAGCACATGGCCTTCACAATTTCATCAGGCTGGTGCTAAAGAAGATAATATTGCTCTTTACTTCTTCGCCAAAGACATTGAAAGTTACGAGAGACACTACAAGCGTCTATTGGATCACATGATTAGAAATGATTTAGCACTTAAAGGGATATTTGATGGTGTTGAGCTTCTCATATTCACATCCAATCAGCTTCCTGAAAATTCACAGCGTTGGAACATGTTGTTTTTCTTATGGGGCATATTTAGAGGGAGGAGGATTAATCATTCAGATTCTGAAAAAAAAATTTGTATTCCCAGTTTGAATGTGATACCTAATGAGAAGGATTTTCCAACAGCTGTCATGACTTTGTCTGAAACTCGCTGTTCACCAAAGCGCATGGATGAAGAATCAATTGCTTCGGGTAAAGCTTGCAGTGCAGTTAATCCATCCACTTCCATTGACCAAGGTCATATTATGGTAAGTAGGAATTTTGATATGAAAGAAACTATTTTTGACCAGACACATTTGGGTTCACAAGTAAACTTAGAGAAGCAAGATAGTAGAATCGACACCAAATCTATGTCAAGGATTCCGACAAGCAGTGGACAATTGTGTCAAGAGATGAATTCCACTGGTTCATCCCTAAAAGGTAGTGAATCAGAGCATGGACAATACAGTGTGTGTAAACCTCCTGAAGCAATGGGAACAAGTGTAAGTAGTACGATTGAGGAAACAAAAACTGATTATGATATTTCTGTTGAGCAAGAAAACTCCATGTCTTCAAGGATTCCTTATGTTAGCACTCAAGAGATAAGCACTGCAAACAGTATCAGTAAGGATGAAATTTTGGAGAGAACAAACAATGATGAAAATCAACGAAGGCCTAAAAGGAAACAGATAGAAGATGATCTCAATATTAATGTGGAGGCAGCATTTCAGGGAGACCTGACCATAAAAGGGGTAAACTGTGAACTACCTAATGATAAAAAAGTTAAGAATACAGATCTTTCAGGTAAAGTTATGGAGGCTGCTACAGTTAATTGTCAGAAAACGCCTTGGAACAAGGTCAATGGTAAATTGGACGACAGTGAAAGTTCTAGCAAGCTGCAGACAGGTTTCAGTGGAGTGTATGGATGTTATAGTTCTGGAGCAAAGGACTCTTATAATGGCAGTTTTGCATCACTTGTAAATGATTTTGGTTCCTGTTCTTCAGTTGAGGACAAAGGATGTAAGGAAGCTTGTGACGAGAAAATCATCCATGAGGACCTTGGAACAATGGAAAGAACCTTCTTTCCTGTTGATGCACATAATAAAAATGACTCACGACTGGTGCTGAATAGCATGTCACTGAAAGGGCCTAATGAGTACCGGGACCAATTTCAAGTTGGGATTCCAAATCTAGAGCTTGCTTTGGGGGGTGAAGCGAAACAGTCACAGAAGGGTATGCTGCCTTTCTTTGTTGGGGCAGACGACAAGAAAAATAACCAGGAAAAGACTCCAGATTTGTTGGAAGATGATCAAGAGGATGACAATGTTGCTGCATCTCTTTCCCTGTCTCTATCCTTCCCATCTTCAAACAAGGAACACACAAAACCTGCTTCAAAAGCTGAGCATTTGCCTGATGGGCATCATGTTAATACTTCGTTGCTTCTTTTTGGGAGATTCACAGACAAATAA 4296 0.4092 MRLESGTCNVCSAPCSSCMHLNRAFMGSKAEEYSDENCRSGEANQYSTDEGDGSSLRSRACERSKHAVSETSNMPSVYSSHDDSLSENAESKQALLEKYQDSKCLEGLDDSTSCISRASKANLVSGNHQINSDRINISCSSASASHLGAELSRIGPSVDMSGSSEILSSKDADIVENLSECCMQNVESALTKEREPIIVTGEKSPADNDISKIHPKSEADTDNDVGGTKDEDHKYSAHDGLHEKAEELVKSPSMPVPQSEDESDESDVVEHDVKVCDICGDSGRDDLLAFCCRCSDGAEHTYCMRVMLDKVPEGDWLCEECQYAEETANQRLVVEGKKSHKVSYTSQISGKRPSESVEVATAAKRQALESSSGSPKASSPKRIVPVSRESSSKSLDNGKVKPGQQIPIRNRPGGDGVELARSLSTGPRSQTARGALLKSNSFNSFNSKPRVKHVDEVVPQKQKGGVEHISKNMETPAGTISKSMSFKSSNLGRATESKVKMLSPKSVTAQDLKGSRHAKESGVSDRKFLSRIDRPVICSTIASSVVSPKGDQKLTPRGETAKPSAVNNNREPKVNQDGKLSSLSKSMNNISHKSLEPQVISERTSTSVYESKQDGLPRARETANQVDKTKDSSIDRVRSSVTNASKSSFCHKCKDFGHPTECCTIGGTQESGAEVSVTATISSKVEMHTGNKLKAAIQAALLRRPELHKKKDVPDQTDEFPTSGTDFKSAVSSQDQVLVSYTSKNSISAEETNARQEILENSTFETCKHSSGNDLKHNFCPTDFSFQLRKSDSEVPASGKLGVRDLPHRASAISSVISKMSAIPEYEYIWQGVFEVHRSGKPPDLYTGIQAHLSSCASPKVLDAVSKFLPEVSLHEVSRLSTWPSQFHQAGAKEDNIALYFFAKDIESYERHYKRLLDHMIRNDLALKGIFDGVELLIFTSNQLPENSQRWNMLFFLWGIFRGRRINHSDSEKKICIPSLNVIPNEKDFPTAVMTLSETRCSPKRMDEESIASGKACSAVNPSTSIDQGHIMVSRNFDMKETIFDQTHLGSQVNLEKQDSRIDTKSMSRIPTSSGQLCQEMNSTGSSLKGSESEHGQYSVCKPPEAMGTSVSSTIEETKTDYDISVEQENSMSSRIPYVSTQEISTANSISKDEILERTNNDENQRRPKRKQIEDDLNINVEAAFQGDLTIKGVNCELPNDKKVKNTDLSGKVMEAATVNCQKTPWNKVNGKLDDSESSSKLQTGFSGVYGCYSSGAKDSYNGSFASLVNDFGSCSSVEDKGCKEACDEKIIHEDLGTMERTFFPVDAHNKNDSRLVLNSMSLKGPNEYRDQFQVGIPNLELALGGEAKQSQKGMLPFFVGADDKKNNQEKTPDLLEDDQEDDNVAASLSLSLSFPSSNKEHTKPASKAEHLPDGHHVNTSLLLFGRFTDK. 1432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00303 1431 MobiDBLite consensus disorder prediction 512 526 - -
Seca5g00303 1431 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 215 334 IPR013083 -
Seca5g00303 1431 MobiDBLite consensus disorder prediction 1151 1170 - -
Seca5g00303 1431 MobiDBLite consensus disorder prediction 67 91 - -
Seca5g00303 1431 MobiDBLite consensus disorder prediction 708 728 - -
Seca5g00303 1431 MobiDBLite consensus disorder prediction 207 239 - -
Seca5g00303 1431 MobiDBLite consensus disorder prediction 495 526 - -
Seca5g00303 1431 MobiDBLite consensus disorder prediction 365 399 - -
Seca5g00303 1431 MobiDBLite consensus disorder prediction 1065 1094 - -
Seca5g00303 1431 MobiDBLite consensus disorder prediction 598 612 - -
Seca5g00303 1431 MobiDBLite consensus disorder prediction 248 267 - -
Seca5g00303 1431 SUPERFAMILY FYVE/PHD zinc finger 262 326 IPR011011 -
Seca5g00303 1431 MobiDBLite consensus disorder prediction 547 581 - -
Seca5g00303 1431 MobiDBLite consensus disorder prediction 1385 1402 - -
Seca5g00303 1431 SMART PHD_3 275 322 IPR001965 -
Seca5g00303 1431 MobiDBLite consensus disorder prediction 561 581 - -
Seca5g00303 1431 MobiDBLite consensus disorder prediction 1155 1170 - -
Seca5g00303 1431 MobiDBLite consensus disorder prediction 1359 1415 - -
Seca5g00303 1431 MobiDBLite consensus disorder prediction 614 635 - -
Seca5g00303 1431 MobiDBLite consensus disorder prediction 362 416 - -
Seca5g00303 1431 MobiDBLite consensus disorder prediction 202 239 - -
Seca5g00303 1431 MobiDBLite consensus disorder prediction 1057 1110 - -
Seca5g00303 1431 MobiDBLite consensus disorder prediction 598 639 - -
Seca5g00303 1431 PANTHER - 273 990 - -
Seca5g00303 1431 MobiDBLite consensus disorder prediction 495 510 - -
Seca5g00303 1431 MobiDBLite consensus disorder prediction 63 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00303 Seca-Chr5 6235481 6242002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00303 272 332 C2H2 Transcription Factor Family AT3G01460 37.705 5.25e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00303 - - gmx:100784908 2011.88