Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00291 ATGTCTCCTTTTGCGAGAAATGTTCCTCTGCTTTGGTTGCTTATAATATTGCTTTCAGCCAGCGATATTGCTCTTGGAAAAACACATGTGCAGGTCGTAAATCATTTGACGGGCAATTTGGACTTAACCCTTCACTGCAAATCTAAGGATGACGATCTTGGAGTCCAACTTCTCCATCCTAGTGAGTCATGGGAATTTAGTTTTAACCCTGCCAAATTCTTTTGGACCACACAGTTCTATTGTCTCTTTCAATGGCAAGATAATGTTGGAGTCCAACAAAAATGGTTTGATATATACATAGAAGATAGGGATTATTGCATAATTTGTACTTGGTCTATAAGCCAAGATAGACCCTGTAGGCAGATTTCAGAAAAGGTGTCTGAATGCATTGCATGGAATAACTAA 405 0.3877 MSPFARNVPLLWLLIILLSASDIALGKTHVQVVNHLTGNLDLTLHCKSKDDDLGVQLLHPSESWEFSFNPAKFFWTTQFYCLFQWQDNVGVQQKWFDIYIEDRDYCIICTWSISQDRPCRQISEKVSECIAWNN. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00291 134 Pfam Plant self-incompatibility protein S1 29 132 IPR010264 -
Seca5g00291 134 PANTHER - 26 121 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00291 Seca-Chr5 6028211 6028615 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00291 27 134 Carbohydrate Esterase AT3G16970 37.931 2.82e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00291 - - cam:101513244 107.457