Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00290 ATGTCTCCTTTTGCGAGAAATGTTCCTCTGCTTTGGTTGCTTATAATATTGCTTTCAGCCAGCGATATTGCTCTTGGAAAAACACATGTGCAGGTCGTAAATCATTTGACGGGAAATTTGGACTTAACCCTTCACTGCAAATCTAAGGATGACGATCTTGGAGTCCAACTTCTCCATCCTAGTGAGTCATGGGAATTTAGTTTTAACCCTGCCAAATTCTTTTGGACCACACAGTTCTATTGTCTCTTTCAATGGCAAGATAATGTTGGAGTCCAACAAAAATGGTTTGATATATACATAGAAGATAGGGATTATTGCATAATTTGTACTTGGTCTATAAGCCAAGATAGACCATGTAGGCAGATTTCAGAAAAGGTGTCTGAATGCATTGGATGGAATAACTAA 405 0.3827 MSPFARNVPLLWLLIILLSASDIALGKTHVQVVNHLTGNLDLTLHCKSKDDDLGVQLLHPSESWEFSFNPAKFFWTTQFYCLFQWQDNVGVQQKWFDIYIEDRDYCIICTWSISQDRPCRQISEKVSECIGWNN. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00290 134 Pfam Plant self-incompatibility protein S1 29 132 IPR010264 -
Seca5g00290 134 PANTHER - 26 121 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00290 Seca-Chr5 6005624 6006028 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00290 27 134 Carbohydrate Esterase AT3G16970 37.931 7.51e-19 75.5