Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00289 ATGTCTCCTTTTGTGAGAAGTGTTCCCCTGCTTTGGTTGCTTATAATATTGCTTTCAGTCAGTGATATTGTTCTTGGAAAGACACATGTGCAGGTCGTAAATCATTTGATAGGCAATTTGGACTTAACCTTTCACTGCAAATCTAAGGATGACGATCTTGGAGAACAACTTCTCCATCCTAGTGAGTCATGGGAATTTAGTTTTAACCCTGCCAAATTCTTTTGGACCGCACAGTTCTATTGTCTCTCAATGTCTCCTTTTGCGAGAAGTGTTCCCCTGCTTTGGTTGCTTATAATATTGCTTTCAGCCTGTGATATTGCTCTTGGAAAAGTACATGTGCGGGTCGTAAATCATTTGACGGGCAATTTGGACTTAACCTTTCAGTGCAAGTCTAAGGATGACGATCTTGGAGCCAACCTTTTCCATCCTAGTGAGACGTGGGAATTTAGTTTTAACCCTTCCTTCTTTTGGACCACACAATTCTATTGTCTCTTTCAATGGCAAGATAATGTTGGAGTCCAAAAGAAATGTTTTGATATATACATACAAAATAGGGATGATTGCATAATTTGTACTTGCTCTATAAGTGATGACACTCTGCTAGAAGCTTGGACCTGCAAGACCTACACTGGAGGATATGCACCAACTTCAAGCCTGAGCTTCAAGCAAGGAAGAGTTGGAGAAATTAGTGTCCTAAAAATAAAGGACACTACCCTACAAAATAAGGGTCACTACCCTACAGAAGGACACCTTGACCCTGGATAG 765 0.4065 MSPFVRSVPLLWLLIILLSVSDIVLGKTHVQVVNHLIGNLDLTFHCKSKDDDLGEQLLHPSESWEFSFNPAKFFWTAQFYCLSMSPFARSVPLLWLLIILLSACDIALGKVHVRVVNHLTGNLDLTFQCKSKDDDLGANLFHPSETWEFSFNPSFFWTTQFYCLFQWQDNVGVQKKCFDIYIQNRDDCIICTCSISDDTLLEAWTCKTYTGGYAPTSSLSFKQGRVGEISVLKIKDTTLQNKGHYPTEGHLDPG. 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00289 254 Pfam Plant self-incompatibility protein S1 112 202 IPR010264 -
Seca5g00289 254 Pfam Plant self-incompatibility protein S1 29 81 IPR010264 -
Seca5g00289 254 PANTHER - 109 207 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00289 Seca-Chr5 5974319 5978730 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00289 27 81 Carbohydrate Esterase AT3G16970 43.636 5.16e-08 49.3