Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00288 ATGTCTCCTTTTGCGAGAAGTGTTCCCCTGCTTTGGTTGCTTATAATATTGCTTTCAGCCAGTGATATTGCTCTTGGAAAAGTACATGTGCGGGTCGTAAATCATTTGACGGGCAATTTGGACTTAACCTTTCATTGCAAGTCTAAGGATGACGATCTTGGAGCCAACCTTCTGCATCCTAGTGAGACGTGGGAATTTAGTTTTAACCCTTCCTTCTTTTGGACCACACAATTCTATTGTCTCTTTCAATGGCAAGATAATGTTGGAGTCCAAAAGAAATGGTTTGATATATACATACAAAATAGGGATGATTGCGTAATTTGTACTTGGTCTATAAGCCAAGATAAACCATGTAGGTACCTTTCAGAAAATGAGTCTAAATGCATTGAATGGAATAAATAA 402 0.3806 MSPFARSVPLLWLLIILLSASDIALGKVHVRVVNHLTGNLDLTFHCKSKDDDLGANLLHPSETWEFSFNPSFFWTTQFYCLFQWQDNVGVQKKWFDIYIQNRDDCVICTWSISQDKPCRYLSENESKCIEWNK. 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00288 133 PANTHER - 26 120 IPR010264 -
Seca5g00288 133 Pfam Plant self-incompatibility protein S1 29 131 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00288 Seca-Chr5 5929018 5929419 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00288 27 132 Carbohydrate Esterase AT3G16970 40.870 4.98e-22 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00288 - - tpra:123922325 111.309