Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00285 ATGTCTCCTTTTGCGAGAAGTGTTCCCCTGCTTTGGTTGCTTATAATATTGCTTTCAGCCAACGATATTGCTCTTGGAAAAGTACATGTGCAGGTCGTAAATCGTTTGACGGGCAATTTGGACTTAACCTTTCATTGCAAATCTAAGGATGACGATCTTGGAGTCCAACTTCTACATCCTACTGAGTCGTGGGAATTCAGTTTTAACCCTGCCAAATTCTTTTGGACCACACAATTCTTTTGTCTCTTTCAATGGCAAGATAATGTTGGAGTCCAACAGAAATGGTTTGATATATACATACAAACTAGAGATGATTGCACAATTTGTACTTGGTCTATAAGCCAAGATAAACCGTGTAGGTCCCTTTCAGAAAAGGTGTCTGAATGCATTGAATGGAATAACTAA 405 0.3901 MSPFARSVPLLWLLIILLSANDIALGKVHVQVVNRLTGNLDLTFHCKSKDDDLGVQLLHPTESWEFSFNPAKFFWTTQFFCLFQWQDNVGVQQKWFDIYIQTRDDCTICTWSISQDKPCRSLSEKVSECIEWNN. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00285 134 PANTHER - 26 121 IPR010264 -
Seca5g00285 134 Pfam Plant self-incompatibility protein S1 29 132 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00285 Seca-Chr5 5681631 5682035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00285 27 134 Carbohydrate Esterase AT3G16970 38.793 3.38e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00285 - - tpra:123922325 108.227