Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00275 ATGTCTCCTTTTGCGAGAAGTGTTCCCTTGCTTTGGTTGCTTATAATATTGCTTTCAACCAGCAATATAGCTCTTGGAAAAACACATGTGAAGGTAGTAAATCATTTGACCAGCAATTTGGACTTAACCTTTCACTGTAAATCTAAGGATGACGATCTTGGAGTCCAACTTCTTCATCCTAGTGAGTCGTGGGAATGGAGTTTTCATGCTTCCGATTTCTTTTGGACCACAATTCTATTGTCTCTTTCAATGGAAAGATAA 261 0.3831 MSPFARSVPLLWLLIILLSTSNIALGKTHVKVVNHLTSNLDLTFHCKSKDDDLGVQLLHPSESWEWSFHASDFFWTTILLSLSMER. 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00275 86 PANTHER - 26 73 IPR010264 -
Seca5g00275 86 Pfam Plant self-incompatibility protein S1 29 73 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00275 Seca-Chr5 5464025 5464285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00275 20 82 Carbohydrate Esterase AT3G16970 34.921 1.02e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00275 - - cic:CICLE_v10024127mg 64.3142