Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00273 ATGCAGAATATGGAAGCATGGTTAATCATCACTATTCTATGCCTTTGCCTTTCATTAATTCTCAAAACCATACATACCCTTCTCTTTCCCTATTCCCCTCTCCCTCCGGGGCCTTCCAAATTGCCTATCATAGGTACCTTTACATTGCTACAACAATACATTACAGATCCTAAAACCCTTCTCCAAAAACTTCATTCCAAATATGGTCCAATCTTCACTCTTCACATTGGTTCTCACACAGACATTTTCATTGCCAATCGCTCCCTTGCCCATCAAGCTTTGATTCAAAAAGGTACCATCTTTGCTGATCGCCCTAAGGCCCTTCCGACAAAGAAGATCATTAGTAGCAACCAACATGACATCCTTTTCAGCTTCTATGGCCCCACATGGCGCCTCTTAAGGAGAAACCTCACTTCAAGAATCCTTCACCCTTCACAGGTCAAGTCCTATGCAAATGCACGCAAGTGGGTTCTTGACATGCTCCTAGAACGCCTCAAATCTGATTCAAATGATTCAAGCAACCCCATAAGGGTCATTGACCATTTTCGTTATGGCATGTTCTCTTTGCTGGTTTTGATGTGTATAGGTGACAAACTCAATGAGAAGCAGATAAGAGAAATTGAGGACAGTCAACGTGGCATGCTTTTGAGCTTTAACAGATACAATGTCTTGAATTTTTGGCCACCAATCACCAGGGTATTGTTCTGGAAGAGGTGGAAGGAATTCTTAGAGCTAAGAAGAGACCAAGAAGCTGTTTTGATTCCTTATATCAATGCTAGAAGGAAATTGAAGGAAGAGAGACTAAGGAATGGCCAAGATGGTGAATTTGTTCTGTCCTATGTGGACACTTTGTTGGATTTGAATTTGCTTGATGATGGTAAAATTTGCACCTTATGCTCGGAATTTCTGAATGCTGGAACAGATACAACTACAACAGCATTGGAATGGATCATGGCAAACTTGGTGAAATACCCTTGTGTCCAAGAAAGGGTTGTGGAGGAAATTAGAGGGGTCATGGTTGATAGAGAGGAGAAGGAAATCAAGGAGGAGGATTTGGAGAAATTGCAGTATCTTAAAGCTGTGATTTTGGAAGGCTTGAGGCTTCACCCACCACTACACTATGTGGCACCTCATAGAGTGACAAAGGATGTTGTTTTGAATGGTTATTTGGTGCCTACCTATGCCTCTGTGAATTTCCTGGTGGCGGAGATTGGGAGGGACCCTACAGCTTGGGATGACCCCATGACCTTTAAACCAGAAAGGTTCATGAATAACAGTGAGGAAAATGGAGGTTCAGCGTTTGATATAATGGGAAGTAAAGAGATAAAGATGATGCCTTTTGGGGCAGGGAGGAGAATGTGTCCTGGCTATGGTTTAGCAATGCTGCACTTAGAGTACTTAGTGGCTAATTTTGTTTGGAATTTTGAGTGGAAGGCCATGAATGGAGACGAGGTTGATCTGTCAGAGAAGCTGCAATTCACAACTGTGATGAAGAATCCTTTGAAGGTTCATATATTACCTAGGCTTTAG 1530 0.4229 MQNMEAWLIITILCLCLSLILKTIHTLLFPYSPLPPGPSKLPIIGTFTLLQQYITDPKTLLQKLHSKYGPIFTLHIGSHTDIFIANRSLAHQALIQKGTIFADRPKALPTKKIISSNQHDILFSFYGPTWRLLRRNLTSRILHPSQVKSYANARKWVLDMLLERLKSDSNDSSNPIRVIDHFRYGMFSLLVLMCIGDKLNEKQIREIEDSQRGMLLSFNRYNVLNFWPPITRVLFWKRWKEFLELRRDQEAVLIPYINARRKLKEERLRNGQDGEFVLSYVDTLLDLNLLDDGKICTLCSEFLNAGTDTTTTALEWIMANLVKYPCVQERVVEEIRGVMVDREEKEIKEEDLEKLQYLKAVILEGLRLHPPLHYVAPHRVTKDVVLNGYLVPTYASVNFLVAEIGRDPTAWDDPMTFKPERFMNNSEENGGSAFDIMGSKEIKMMPFGAGRRMCPGYGLAMLHLEYLVANFVWNFEWKAMNGDEVDLSEKLQFTTVMKNPLKVHILPRL. 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00273 509 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00273 509 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00273 509 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00273 509 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00273 509 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00273 509 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00273 509 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00273 509 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00273 509 FunFam Cytochrome P450 family protein 30 509 - -
Seca5g00273 509 SUPERFAMILY Cytochrome P450 35 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00273 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Seca5g00273 509 Gene3D Cytochrome P450 31 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00273 509 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00273 509 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00273 509 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00273 509 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00273 509 Pfam Cytochrome P450 35 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00273 509 CDD CYP77_89 67 502 - -
Seca5g00273 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 15 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00273 Seca-Chr5 5436549 5438078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00273 4 508 Cytochrome P450 AT1G64940 54.319 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00273 K24184 - gmx:100816275 791.186