Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00266 ATGTCTCCTTTTGTGAGAAGTGTTCCACTGCTTTGGTTGCTTATAATATTGTTTTTAACTAGCGATATTGCTCTTGGAAAAACACATGTGAGGGTCGTAAATCATTTGATTGGAAATTTGGACTTAACCTTTCACTGCAAATCTACGGATGACGATCTTGGAGTCCAACTTCTCCATATCTATGAGTCGTGGGAATTCAGTTTTAACCCTTCCATTTTCTTTTGGACCACACAATTCTATTGTCTCTTTCAATGGGAATATGGTGATGGAGTCCAACAGAAATGGTTTGGTATATACAAAGGAAATAGGGATGATTGCAAAATCTGTACTTGGTATATAACCCAAGATAGACCATGTAGGTACCTTTCAGAAAAGGTGTCTGAATGCATTGAATGGAATAACTAA 405 0.3704 MSPFVRSVPLLWLLIILFLTSDIALGKTHVRVVNHLIGNLDLTFHCKSTDDDLGVQLLHIYESWEFSFNPSIFFWTTQFYCLFQWEYGDGVQQKWFGIYKGNRDDCKICTWYITQDRPCRYLSEKVSECIEWNN. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00266 134 Pfam Plant self-incompatibility protein S1 29 132 IPR010264 -
Seca5g00266 134 PANTHER - 26 121 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00266 Seca-Chr5 5261602 5262006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00266 20 134 Carbohydrate Esterase AT3G16970 37.398 1.78e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00266 - - gra:105767636 100.138