Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00172 ATGGACACTGATACTGATAATGATTTCACGTTTTGTCAGGTTAGTTCACCTATGGATCAGGATGGTCCTGAAACGAAGAAGCTTGCTTCAGATATTTCTGACATTTCCATAAAAGAAGAATCCTCAAATGCAAGCAGTAATAGTCATAATAGTGGTTTCTTGTGGAAGGATGGATTACCAAATGATTCCAACTCTAAAAAAGAGGGTACAGTTGGTTCCTTGTCTTTCAGTGTAATTAACACAGCTTCAAATCAGCCAAGTGAATTGTCCACAAAATCAGTACCAAGCGATGCTAAGAATTCACCTCAGAAGTCACCAGAACAGAAGAATCCCGTTAAAAAGCCAACTGTTCGGGCCAAAGTTCCTTTTGAGAAAGGCTATAGTCAAATGGATTGGCTCAAGCTTACCCAATCACATCCTGACCTTGCAGGTTTAAAAGGACAGTCAAACAGGAGGCTTATTTCTATTGCTGAAGTTAGAAAAAACCAAACAGAGGGCCAGATGTGGACTGTATTAAAAGGCCGTGTTTACAATATATCTCCATATATGAAGTTTCACCCTGGAGGTACAGGCGTACATCTATCGACTCAAACTTCAAGTTCATAA 606 0.396 MDTDTDNDFTFCQVSSPMDQDGPETKKLASDISDISIKEESSNASSNSHNSGFLWKDGLPNDSNSKKEGTVGSLSFSVINTASNQPSELSTKSVPSDAKNSPQKSPEQKNPVKKPTVRAKVPFEKGYSQMDWLKLTQSHPDLAGLKGQSNRRLISIAEVRKNQTEGQMWTVLKGRVYNISPYMKFHPGGTGVHLSTQTSSS. 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00172 201 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 182 189 IPR018506 GO:0020037
Seca5g00172 201 Gene3D - 144 197 IPR036400 -
Seca5g00172 201 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 151 201 IPR001199 -
Seca5g00172 201 MobiDBLite consensus disorder prediction 1 20 - -
Seca5g00172 201 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 151 190 IPR036400 -
Seca5g00172 201 MobiDBLite consensus disorder prediction 35 70 - -
Seca5g00172 201 MobiDBLite consensus disorder prediction 82 110 - -
Seca5g00172 201 MobiDBLite consensus disorder prediction 1 70 - -
Seca5g00172 201 Pfam Cytochrome b5-like Heme/Steroid binding domain 157 194 IPR001199 -
Seca5g00172 201 PANTHER CYTOCHROME B5 REDUCTASE 4 FAMILY MEMBER 4 190 - -
Seca5g00172 201 MobiDBLite consensus disorder prediction 82 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00172 Seca-Chr5 3441022 3444345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00172 149 196 NADPH P450 reductases AT5G53560 39.583 2.41e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00172 - - lja:Lj0g3v0067269.1 280.411