Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00158 ATGGCAATAGCGATAACCCAATGTTCAGAAAAGCTAGGCTACCTCATATTTCAATTAGGCAAAAATTTCGTCATGTTTATGGCGATGGTGATTGCTTGCAACGGTTTACATTTCCTACTAAGGCCTTATTCACAGCCTCGCATTACATCTGACATACTTGTAGGACTAATTATGGGCAATGCACCTTTTTTACGTGACCTATATGAGGAATTCAACTTAACCTTTGAATTTGTAATTGATTTTGGAATGATGTGTTACATGTTTGCATTGGGTATAGAAATGGATCCTTATGTACTATTCAAAAGACCAAGCAGGGAAGCTCAAGTTGCATATGCAGGAGTAATCACCACATTTATCTTAGCATGTACCATAACCCCACTTCTACATTACTTCTCAAGCCTATATGAAATAGAATTCACCCTCTCTTTTTCGACACTTCTCTCAAGCACAGCATCACCCGTTCTAACTCGCCTAATAACTAACATGAAAATAGGCAAATCAGATATTGGAAGGCTTGTGATATCAGCAGGGATGTACTCAGATTTTCTGTGTTCTTTGTTTCTTTCAATTGGCTACATATCCATGCCAATGGATACAATTTGCACTGATTCTGAAGAAGAGAAGCGTCTTAAGAAGGTTATTACAATGGGGTGTGCAGTGGTTGCGCAGACACTGTTCACAGCATTGGTGTCACCAGTTTTTATGAACTGGGTTAACAATGAAAACCCTGAAGGGAAACCCATGAAAGGTTCACACCTGGTACTGTCAATTGCCTTCATGGTCATGATTTGTGCCTCCTCAACTCTATACGATTATAGTCCAATTCTAAGTGCGTTTATGACAGGGCTATGTTTTCCCCGGGAGGGCAGAGTTTCCAAATGGGTTATCGGCAAAATCAACTATTTGTTGACCACCATCTTCTTTCCCATCTTTTTCTTGTGGATGGGGTATGCAGCTGATTTCAGGGAGTTTCAGCCTGGAGATGCAGAAACATGGGCGAAATTACTTGTACCCATGACCATAACAATACTAGGTAAAGTTGCTGGAACTGTTGTTTCTGGCTCAATGCTTGGCTTTAACTGGCCTGAATCAGTTGCAATTGGATTGCTTCTCACCACCAAGGGCCATTTTCATATCTACATGGCTATCAAAGTGGCAATGGTGCCTGCCCCTGTAGTTGTGGCAAATATCATCAAACGTGCTAGGAAAAGGGCACCTACACATCGCATGGCCCTCCAATTACTTGATCCATCAAGTGAGTTAAGAATACTCTTGTGCCTTCATGGACCTGATAATGTTCCTGCTTCCATCAACCTCATGGAGATCTCAAGAGGGATAGTAGAACCTGGCATTATGTTATATGTTGCGGAAATGATTGAACAAACTGATGAATTAGCACCCTTAATAGAGAAAGGTGAAGGACCAGAAACAACAACTGTGAAAGACAATGCAGTTGTGGAGATGAGAGAAAAAATAACCAGCTCATTTCAAACCTATTTAGATGCTGATGGTGATGGTATTACGCTCAAAAGAGCTTTGGCAGTGTCAACAATCACTAACATGGCACAGGACATTTGTAGTTTAGCAGAGGATTTGACAACTGCCCTCATCATACTACCATTCCACAGGACCCAACGTCAAGATGGAAAATTGGATAGTGGCAATCAAGGGTTCAGATATGTCAACAGAAAGTTATTGAGGAGTGCTCCTTGTTCCGTGGGGATTCTAGTGAACAGAGGCTTAGGGTCCATTGGAAAGATATCAAGAACTGAAGTATCACTCAATGTGGCAACAGTGTTCATTGGAGGAAAAGATGATAGAGAAGCACTTGCCTATGCCGGTCGAATAGCACGACATCCAGGGGTGAAAATCACAGTTATAAGATTCCTGGTAGATACAAGTGCAGAATCCTCAAGAATAGCAGCTTACAGGGTAACCCTTCCAGAGCAGGAGGAGGAGATGGGGCTGGATGATGAATGCTTTGCACAGTTCTATGAGAAGCATATAGCTGGAGGTCGTATTTCCTATACAGAGAAGCATCTTACTAATGCAGCTGAGACATTCACTACTCTTAGATCATTTGAAGGAACATACTCACTGGTCATTGTAGGAAGAGAAGGTGGAGTGAATTCTATATTGACAAAGGGGATGAATGATTGGCAACAGTGTCCAGAATTGGGACCAATTGGGGATGTTCTTTCAGGACCAGACTTTGCAAAGACAGTCTCTGTGTTAATAATCCAACAACACAAAATTAAAGGTGAACTAGATGGACTTGATGATGACTTCTCCATCATGTAG 2301 0.4163 MAIAITQCSEKLGYLIFQLGKNFVMFMAMVIACNGLHFLLRPYSQPRITSDILVGLIMGNAPFLRDLYEEFNLTFEFVIDFGMMCYMFALGIEMDPYVLFKRPSREAQVAYAGVITTFILACTITPLLHYFSSLYEIEFTLSFSTLLSSTASPVLTRLITNMKIGKSDIGRLVISAGMYSDFLCSLFLSIGYISMPMDTICTDSEEEKRLKKVITMGCAVVAQTLFTALVSPVFMNWVNNENPEGKPMKGSHLVLSIAFMVMICASSTLYDYSPILSAFMTGLCFPREGRVSKWVIGKINYLLTTIFFPIFFLWMGYAADFREFQPGDAETWAKLLVPMTITILGKVAGTVVSGSMLGFNWPESVAIGLLLTTKGHFHIYMAIKVAMVPAPVVVANIIKRARKRAPTHRMALQLLDPSSELRILLCLHGPDNVPASINLMEISRGIVEPGIMLYVAEMIEQTDELAPLIEKGEGPETTTVKDNAVVEMREKITSSFQTYLDADGDGITLKRALAVSTITNMAQDICSLAEDLTTALIILPFHRTQRQDGKLDSGNQGFRYVNRKLLRSAPCSVGILVNRGLGSIGKISRTEVSLNVATVFIGGKDDREALAYAGRIARHPGVKITVIRFLVDTSAESSRIAAYRVTLPEQEEEMGLDDECFAQFYEKHIAGGRISYTEKHLTNAAETFTTLRSFEGTYSLVIVGREGGVNSILTKGMNDWQQCPELGPIGDVLSGPDFAKTVSVLIIQQHKIKGELDGLDDDFSIM. 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00158 766 Gene3D - 21 395 IPR038770 -
Seca5g00158 766 PANTHER CATION/H + ANTIPORTER 27 751 - -
Seca5g00158 766 FunFam Cation/H(+) antiporter 28 20 407 - -
Seca5g00158 766 Gene3D - 450 719 - -
Seca5g00158 766 Pfam Sodium/hydrogen exchanger family 28 388 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00158 Seca-Chr5 3215687 3218868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00158 24 766 Antiporter Super Family AT3G52080 49.292 0.0 781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00158 K26731 - gmx:100815945 1165.21