Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00139 ATGGTTCAGATGAAGAAGTTGCTTAATGGTAATAAATGGGCGGTTGCCGTTGAACATGCCATTGGGAGATTGCTCAATTCCTTTATTGTGACTGATCACAAGGATTTTCATCTTCTGAAACAATGTGCAAAGGAAGCAAACTATGGTTACCTTCGAATTATTATTTATGATTTTTCAACCCCAAGATTGACGATACCACAACACATGCTTCCTGATACAGAACATCCAACAACTCATTCTGTCTTACAATGTGAGAATCACACTGTGAATAATGTCTTAGTGGATCTGGGAAATGTTGAGAGACAAGTGCTCGTTAACGATTATGATATTGGAAAAGCGGTTGCCTTTGATCAAAAGATCCCAAATCTGAAGGAGTTAGTTACAGTTAGTCCTAGTAGACAAAGTACAGTAGATACAGTAGAGAATGCAATTACAATGAATGCACTACATTAA 453 0.3731 MVQMKKLLNGNKWAVAVEHAIGRLLNSFIVTDHKDFHLLKQCAKEANYGYLRIIIYDFSTPRLTIPQHMLPDTEHPTTHSVLQCENHTVNNVLVDLGNVERQVLVNDYDIGKAVAFDQKIPNLKELVTVSPSRQSTVDTVENAITMNALH. 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00139 150 SUPERFAMILY Smc hinge domain 11 120 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Seca5g00139 150 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 7 132 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00139 7 129 Structural Maintenance of Chromosomes family AT5G61460 63.415 8.03e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00139 K22804 - gmx:100816916 201.83