Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g00135 | ATGAAACCTTTTCTTTTCTTTCTCACATTCTCCTTCTTTTGCCAAACACAGTTAGTTTTCTCAGCTACAACTCTGCCCCTCCAACTCATCACCCTGCTTTCAATAAAATCCTCCCTCATAGACCCTCTTAAGAACCTCCATGACTGGGACCCTTCCCCCACCTTCTCCAACTCCAATTACCTACAACACCCAATATGGTGTTCCTGGAGAGGCATCACATGCCACCCAAAAACAGCACAAATCATCTCCCTTGACCTCTCTCGCCTCAACCTTTCAGGCACAATCTCAGGCGAAATCCGCTACCTATCCACCTTAAACCACTTGAACATCAGTGGAAATGACTTCAGTGGAGCTTTCCAAGCAGCAATTTTCCAACTCACTGAGCTGAGGACTCTTGACATCAGCCACAACTCCTTCAACTCAACTTTCCCACCAGGAATCTCAAAGCTCAAGTTCTTAAGGGTCTTCAATGCTTACAGCAACAGCTTCACTGGCCCTCTACCTCAAGAGCTAATCAGGCTTCGGTTTCTTGAAGAGCTCAACCTCGGAGGAAGCTACTTCCGGGACATGATTCCACAAGGTTATGGCACTTTCCCAAGACTCAAGTTCCTAGATTTAGCAGGTAACGCCTTGGAAGGTCCACTACCACCTCAACTAGGCTCATTACCCTTGCTGGAACACTTGGAAATAGGATACAACCCATTCTCAGGACCATTACCAGTGGAATTGGCAATGCTGTCTAATCTCAAATACTTGGACATCTCATCTACTAACATCTCAGGAAGCTTGATCTCAGAACTTGGGAACATGACCATGCTGGAGACATTGTTGCTCTTCAAGAATCGCCTAACAGGCCAAATCCCATCAAGCATAGGTAACTTGAAATCCCTGAAAGCTCTTGACTTATCAGACAATGAACTCACAGGGCAAATTCCAACACAAGTTTCTATGCTAAAGGAACTAACCAGGTTGAGCCTCATGGAAAACAAGCTAACAGGGGAAATACCACTAGGAATTGGAGAACTACCAAAGTTGGACACTCTCCTTCTCTTCAACAACTCACTAACAGGAACCCTCCCACCCCAACTTGGCTCCAATGGGTTACTACAAATTCTAGATGTTTCAACAAACTCACTCCAAGGTCCAATCTCTGAAAATGTGTGCAAAGGAAACAAGCTCTTTAAGTTCATACTCTTCAACAACAAATTCAACAATGTTCTCCCAAAATCCCTCACCAACTGCACCTCACTCGCTAGGGTTCGCATCCAAAACAACCACCTCAATGGTTCCATCCCTCAAGAGCTAACACTCCTCCCCAACCTAACGTTCCTTGACATGAGCAACAACAACTTCCAAGGTCAAATTCCTCCAAACTTGGGGAACTTACAGTACTTCAACATCTCAGGAAACTCCTTTGGAAACCCCTTACCAAGTAGCATATGGAATGCGAGTAACCTTCAGATTTTCTCAGCTGCATCGTCGAAAATCACTGGTCAGATTCCAGATTTCATTGGTTGCCAAACCATATACAGGATTGAATTGCAAGGAAACTCCATCAATGGTAGCATTCCATGGGACATTGGTCACTGTCAGAAGCTGATTCTGTTGAATCTCAGCAGAAACTCCCTCACCGGAATCATTCCCTGGGAAATCTCAACGCTTCCTTCCATCACCGACGTTGACCTTTCTCATAACTCCCTCACCGGAACCATACCTTCGAACTTCAACAACTGCTCTACTCTCGAGAACTTTAACGTTAGCTTCAACTCCCTCACCGGACCTATTCCTTCCTCCGGCGTCTTCCCCAGCCTCCACCCTTCCTCCTACTCCGGCAACCAGGGCCTCTGCGGGAGAATCCTCGCCAAGCCATGCGCCGCCGACGCACTCGCCGCCGGCGAGAACGAGCTCGAGGTCCGCCGGCAGCAACCGAAGCGAACCGCCGGTGCAATCGTTTGGATCGTCGCGGCGGCGTTCGGGATCGGGCTGTTCGTTCTCGTCGCAGGGACGCGGTGCTTCCATGCGAACTATAACCGTCGATTCAGCGGCGAGGGCGGGAACGAGATCGGGCCGTGGAAGTTAACGGCGTTTCAGCGGTTGAATTTCACGGCGGAGGATGTGTTAGAGTGTTTGTCTATGTCAGATAAGATACTGGGGATGGGGTCCACAGGAACGGTTTATAGGGCGGAAATGCCAGGTGGCGAGATCATAGCGATTAAGAAGCTGTGGGGGAAGCATAAGGAGAATATCAGACGGAGGAGAGGGGTTTTGGCTGAGGTGGATGTGTTGGGGAACGTGAGGCACAGGAACATAGTGAGGTTGTTAGGGTGTTGCAGCAACAGGGAGTGCACAATGCTGCTTTATGAGTACATGCCAAATGGGAACTTGGATGATTTGTTGCATGGGAAGAATAAAGGAGACAATATGGTTGCTGATTGGTTCACCAGGTACAAGATAGCCCTGGGTGTGGCTCAGGGGATTTGCTATCTTCACCATGACTGTGATCCCGTCATCGTGCATCGGGATCTCAAACCTAGTAACATATTATTGGACGGTGAGATGGAGGCCAGAGTGGCAGATTTTGGAGTTGCCAAGTTAATTCAAACAGATGAGTCCATGTCTGTTATTGCTGGATCCTATGGCTACATTGCTCCAGAATATGCTTACACACTTCAAGTGGATGAGAAGAGTGATATCTACAGCTATGGAGTGGTGTTGATGGAGATTTTGAGTGGAAGGCGTTCGGTGGATGCAGAATTTGGTGATGGGAATAGCATTGTGGATTGGGTAAGGTCTAAGATCAAAACAAAAGATGGGATGGATGATGTATTGGATAAGAATGCAGGGGCAGGGTGTGGCTCAGTGAGGGAGGAAATGATACAAATGCTTAGAATTGCATTGCTTTGCACAAGCAGGAACCCAGCAGATAGGCCTTCCATGAGAGATGTTGTGTTGATGTTGCAAGAGGCTAAGCCAAAAAGGAAATTGCTTGATAGTGTTATTGTAGGTCGATGTGCTAGTGACAATGTGGTTGGTGGTGCTGATATTCCTTTGCCACAAAAGCCAACTGCGGAAAGTTAA | 3078 | 0.4756 | MKPFLFFLTFSFFCQTQLVFSATTLPLQLITLLSIKSSLIDPLKNLHDWDPSPTFSNSNYLQHPIWCSWRGITCHPKTAQIISLDLSRLNLSGTISGEIRYLSTLNHLNISGNDFSGAFQAAIFQLTELRTLDISHNSFNSTFPPGISKLKFLRVFNAYSNSFTGPLPQELIRLRFLEELNLGGSYFRDMIPQGYGTFPRLKFLDLAGNALEGPLPPQLGSLPLLEHLEIGYNPFSGPLPVELAMLSNLKYLDISSTNISGSLISELGNMTMLETLLLFKNRLTGQIPSSIGNLKSLKALDLSDNELTGQIPTQVSMLKELTRLSLMENKLTGEIPLGIGELPKLDTLLLFNNSLTGTLPPQLGSNGLLQILDVSTNSLQGPISENVCKGNKLFKFILFNNKFNNVLPKSLTNCTSLARVRIQNNHLNGSIPQELTLLPNLTFLDMSNNNFQGQIPPNLGNLQYFNISGNSFGNPLPSSIWNASNLQIFSAASSKITGQIPDFIGCQTIYRIELQGNSINGSIPWDIGHCQKLILLNLSRNSLTGIIPWEISTLPSITDVDLSHNSLTGTIPSNFNNCSTLENFNVSFNSLTGPIPSSGVFPSLHPSSYSGNQGLCGRILAKPCAADALAAGENELEVRRQQPKRTAGAIVWIVAAAFGIGLFVLVAGTRCFHANYNRRFSGEGGNEIGPWKLTAFQRLNFTAEDVLECLSMSDKILGMGSTGTVYRAEMPGGEIIAIKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHGKNKGDNMVADWFTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGRRSVDAEFGDGNSIVDWVRSKIKTKDGMDDVLDKNAGAGCGSVREEMIQMLRIALLCTSRNPADRPSMRDVVLMLQEAKPKRKLLDSVIVGRCASDNVVGGADIPLPQKPTAES. | 1026 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g00135 | 1025 | SUPERFAMILY | Protein kinase-like (PK-like) | 714 | 986 | IPR011009 | - | |
Seca5g00135 | 1025 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 73 | 265 | - | - | |
Seca5g00135 | 1025 | FunFam | leucine-rich repeat receptor-like protein kinase TDR | 790 | 998 | - | - | |
Seca5g00135 | 1025 | Pfam | Leucine Rich Repeat | 532 | 553 | IPR001611 | GO:0005515 | |
Seca5g00135 | 1025 | SUPERFAMILY | RNI-like | 83 | 417 | - | - | |
Seca5g00135 | 1025 | ProSitePatterns | Protein kinases ATP-binding region signature. | 717 | 740 | IPR017441 | GO:0005524 | |
Seca5g00135 | 1025 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 196 | 988 | - | - | |
Seca5g00135 | 1025 | SMART | LRR_typ_2 | 554 | 577 | IPR003591 | - | |
Seca5g00135 | 1025 | SMART | LRR_typ_2 | 198 | 222 | IPR003591 | - | |
Seca5g00135 | 1025 | SMART | LRR_typ_2 | 342 | 366 | IPR003591 | - | |
Seca5g00135 | 1025 | SMART | LRR_typ_2 | 126 | 150 | IPR003591 | - | |
Seca5g00135 | 1025 | SMART | LRR_typ_2 | 438 | 462 | IPR003591 | - | |
Seca5g00135 | 1025 | SMART | LRR_typ_2 | 294 | 318 | IPR003591 | - | |
Seca5g00135 | 1025 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 | 681 | 789 | - | - | |
Seca5g00135 | 1025 | Gene3D | Ribonuclease Inhibitor | 340 | 627 | IPR032675 | - | |
Seca5g00135 | 1025 | ProSiteProfiles | Protein kinase domain profile. | 711 | 996 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g00135 | 1025 | Pfam | Leucine rich repeat | 273 | 331 | IPR001611 | GO:0005515 | |
Seca5g00135 | 1025 | Gene3D | Ribonuclease Inhibitor | 28 | 94 | IPR032675 | - | |
Seca5g00135 | 1025 | Gene3D | Ribonuclease Inhibitor | 95 | 339 | IPR032675 | - | |
Seca5g00135 | 1025 | FunFam | Leucine-rich repeat receptor-like protein kinase TDR | 316 | 626 | - | - | |
Seca5g00135 | 1025 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 837 | 849 | IPR008271 | GO:0004672|GO:0006468 | |
Seca5g00135 | 1025 | SMART | serkin_6 | 711 | 990 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g00135 | 1025 | Gene3D | Phosphorylase Kinase; domain 1 | 692 | 789 | - | - | |
Seca5g00135 | 1025 | Gene3D | Transferase(Phosphotransferase) domain 1 | 790 | 1001 | - | - | |
Seca5g00135 | 1025 | Pfam | Protein kinase domain | 714 | 983 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g00135 | 1025 | SUPERFAMILY | L domain-like | 311 | 616 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g00135 | Seca-Chr5 | 2764051 | 2767953 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g00135 | 3 | 994 | Receptor kinase-like Gene Family | AT1G08590 | 42.090 | 0.0 | 743 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Seca5g00135 | Pkinase | 2.1e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g00135 | - | - | gmx:100809695 | 1733 |