Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00067 ATGCCGGATGTTCAGACACTTGTTAATGATTTTGTGAATCAGCTTAAGAAACGTAAAATTGAAGGTTCTCAGGCCATAGCAAAACAGACGGCGGAGTTGCTCCGGTCTGTGATTTCACAGCAGCGGGTGCCACAGACAAACCAGGCTACAGCACTGATTAATGCAGTAAGGGCTGTGGGAGAGAAGCTTATTGCTGCTAATCCTGTTGAGCTAGCTGTGGGAAACATTGTGAGGCGTGTTTTGCACATTATAAGAGAGGAGGATCTTTCCCTTGCCACAACTGCTATAGCTGATTTGGGGCTATCAGCTGCAAGTGATGATGAGGATGATGTGGAGCGAGATGATCATCCTGTTTTATCTGCTGCTGCTGTTGCAGCTGCTGCAAGAAGCACCTTGCGCCCACCATCATTGCAAACTCTTCTAGAGGATACACCCGATTCGGCTGTTGTTCCGCTCACATCTTCCTCAGGGGGTGAATCTGAAGGGAAAAGTAGATGTGAGGATGGCATGAGGCAACCTGTTGACAAAGGTCCAAGAGGTCGGAAGTTGAAGCACGATGTCATTGAAGCAGTTAATGAACTTATTCAAGACATATCCACTTGCTATGAACAAATAGCTGAGCAAGCAGTAGAGCACATTCATCAAAATGAGGTAATATTAACACTAGGCAGTTCAAAGACAGTGTTGGAATTTCTTTATGCTGCGAAGGAAAAAAAGAGATCATTTAAGGTCTTTGTCGCTGAAGGTGCCCCAAGATATCAGGGACATCTCCTTGCAAAAGAATTGGCTGCTAGAGGTTTACAGACCACAGTAATTACTGATTCTGCAGTTTTTGCTATGATTTCCCGAGTCATAGTTGGAGCTCATGCTGTCATGGCTAATGGTGGAGTTATTGCCCCAGTTGGGTTAAATATGGTTGCACTTGCAGCTCAAAGGCACGCTGTTCCTTTTGTTGTACTTGCGGGGAGTCACAAGTTGTGCCCTTTGTATCCTCACAATCCTGAAGTCCTATTGAATGAACTGAGATCTCCGTCTGAGCTACTTGACTTTGGGGAATTCTCAGATTGCATGGATTCTGCAAGTGGTGCTGGAACTCTTCATGTCGTCAATCCAACATTTGATTATGTGCCACCAAAACTTGTTAGTCTCTTTATTACTGACACAGGAGGGCATAACCCATCATATATGTACCGTCTCATAGCTGATTATTATTCAGCTGATGATTTGGTGGTGAAACGAAGACCAGCTATAGGGAGTTGA 1260 0.4468 MPDVQTLVNDFVNQLKKRKIEGSQAIAKQTAELLRSVISQQRVPQTNQATALINAVRAVGEKLIAANPVELAVGNIVRRVLHIIREEDLSLATTAIADLGLSAASDDEDDVERDDHPVLSAAAVAAAARSTLRPPSLQTLLEDTPDSAVVPLTSSSGGESEGKSRCEDGMRQPVDKGPRGRKLKHDVIEAVNELIQDISTCYEQIAEQAVEHIHQNEVILTLGSSKTVLEFLYAAKEKKRSFKVFVAEGAPRYQGHLLAKELAARGLQTTVITDSAVFAMISRVIVGAHAVMANGGVIAPVGLNMVALAAQRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDSASGAGTLHVVNPTFDYVPPKLVSLFITDTGGHNPSYMYRLIADYYSADDLVVKRRPAIGS. 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00067 419 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 2 410 - -
Seca5g00067 419 SUPERFAMILY NagB/RpiA/CoA transferase-like 5 408 IPR037171 -
Seca5g00067 419 Pfam Initiation factor 2 subunit family 19 393 IPR000649 GO:0044237
Seca5g00067 419 MobiDBLite consensus disorder prediction 138 160 - -
Seca5g00067 419 MobiDBLite consensus disorder prediction 161 181 - -
Seca5g00067 419 MobiDBLite consensus disorder prediction 138 181 - -
Seca5g00067 419 Gene3D - 201 403 IPR042529 -
Seca5g00067 419 FunFam translation initiation factor eIF-2B subunit beta 201 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00067 Seca-Chr5 1478346 1484167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00067 1 411 Eukaryotic Initiation Factors Gene Family AT3G07300 78.846 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00067 K03754 - gmx:100778545 710.679