Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00052 ATGGCTCATTTACTGGCCAGTACTTCACATTCACATAAACCTATATGTCCAAACTTGGCCTGTGGTGTTAGAACAGGAACAGGAACAGGACCCAGAAATGCATGTTACAGAAAAAGCAGGAGTTGTTTGGTGTTGCAATTGCAATGCAGCAGCAGCAGTAGTTCACAATTGTCTCGTGCTGATGCTGATCAGTTGCAGAATGAGAATGGTAGTGGAAAGCAGCTTAAGCAACAATTTGAGTTTTTGGTGTGTGAATATGGATGGAGGGTAAGAAGACTCATTGAGAATAATGCAGATGAGATAATGATGGCATCTCAAGTTCAAGCTGAAGCATTCCATGTTCCTGTCGCTCTTTTCAACGACCTGTTCTTCCAATTCTTTCAGGCGGAAGTGCTTTCGGGGCTCCTTTACAAGCTTAAAAACTCACCTCCCAATAGGTATGCTTGCTTGGTGGCTGAGTTAGCAAAAAATGATCCAGATTCACCAAAACAACTTGTAGGTGTCATAGATGCCACTGTCATGAGAGACAAAGATGTGCTTCAACATCTCCCTGCTGAAGCACAAGAGTACCTTTACATATCAGGAATAGCAGTCTCCAAAACTTTCAGGAGGAGGAAAATAGCTACTGCTTTGTTGAAAGCCTGTGACATTCTTTCCATTTTGTGGGGTTTTGAGTTTCTTGCACTTCGAGCTTATGAAGACGATCTGGGTGCTCGAAAATTGTATGCAAATGCTGGGTACCAAGTTGTGTCTAGAGATCCACCATGGACAAGTAATTGGATTGGAAGGAAATGCCGTGTTCTTATGATCAAAAGAACTAATTTGCCTGCATAG 834 0.4245 MAHLLASTSHSHKPICPNLACGVRTGTGTGPRNACYRKSRSCLVLQLQCSSSSSSQLSRADADQLQNENGSGKQLKQQFEFLVCEYGWRVRRLIENNADEIMMASQVQAEAFHVPVALFNDLFFQFFQAEVLSGLLYKLKNSPPNRYACLVAELAKNDPDSPKQLVGVIDATVMRDKDVLQHLPAEAQEYLYISGIAVSKTFRRRKIATALLKACDILSILWGFEFLALRAYEDDLGARKLYANAGYQVVSRDPPWTSNWIGRKCRVLMIKRTNLPA. 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00052 277 Pfam Acetyltransferase (GNAT) family 142 247 IPR000182 GO:0016747
Seca5g00052 277 CDD NAT_SF 164 215 - -
Seca5g00052 277 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 110 272 IPR016181 -
Seca5g00052 277 PANTHER N-ALPHA-ACETYLTRANSFERASE 85 273 - -
Seca5g00052 277 Gene3D - 86 273 - -
Seca5g00052 277 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 102 274 IPR000182 GO:0016747
Seca5g00052 277 FunFam Histone acetyltransferase HPA2 and related acetyltransferases 94 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00052 Seca-Chr5 1149496 1151279 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca5g00052 Acetyltransf_1 2.6e-08 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00052 - - gmx:100808330 391.349