Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00026 ATGGCTTTTTGGGGTGTGGAAGTAAAATCGGCAAAGCCTTTTACTCATGAATATGATTCTTCCAAAGGACGCCTCCACATTTCTATGGCTACTTTGGGCTTCGGCACTTCAACCGCCAAAAGCACACTTCAATGTAATGTGGGAAACAGGAGTCCTGTATATCTGTGTTCTCTCTATCCTGGAAACACCGAATCATTGCAATTAAATTTGGAGCTCGAGGAAGATGATAAAGTCATTTTCTCCGTTCTTGGCCCTAGGAGCATTCATCTCTGTGGCTATTATCTTGCCTCCACTTTCCGGAAAACTATCGCTGCTGAAAGGGAATCATACGGGGAAGATATTGCAGATACAGAGACAGAGAAATCTGATTACAGTGATGAAGACGATTATGATGATAGTTTTATTGATGATGATGATGATCCGGAGGTTTTCCCACCAACTCCTATTTCCAATGAAGTGACTGTAGAGGAAGCTTCCCGTGATAGCAGACCAAAAGGTAAGAAAGGCAACCGTGGAAGGCTGAGGAAGAAGTACCAGTCAGTAGACTCAGATGATGACGGCTCTTTAGAACAAAAGATAATTGTCAATGACAGTGTGGATGACCAATATGGCCTACCAATTTCATCTCTTTACAAGAATAAAACCTCTCAAATGGCCTTGTTTGAGGAAAGTGATAATAATATTGACAGAGGAGCAGATGATGCTGGCAACATGAATGGTGAAGATGATAGAAATAGTAATACTGAAACAAATTTAAAAACTGCTGATGTTTTTGTAGATTGCCAGATGCAAAGGGAAGCTGAACTGTCTGACCACTTGGTAGATCCTTGCAACCCCATGGATGTTGAGTATGTTAAAAAATTAAAAAAGAAAAAGAAGGGAAAGGGAAAAGAAACAAAGAGTCCGTCTAGTGACCAGTCTATCAAACTAAATAATGCTGTGCAAGATGAGCCAAAAATGGACAAGATGACCCAGGGTTTTCTGGAAGTAAATGAACACCAGCAACAGCATGCTGATGATAAGGAAACTGAAATCACGGATAAAATCCTACCTTCCTCTGAGGTTGGTCAAGGACAGGGCAAAAAAGCAAAGAAGAAAAGAAAAGAACTATCAAAAGAGGGGACAGTTTTCATTTCTAATGATGCTTATCATAGCAATCCATCTAATCTGCCTCAGAGAGATGAACACAATAAACAGGACACAGTTAATGAGGATGTTAAGATTTCAGACAATGTTGCATTACCTTCTGCTGAAATGGATCCTGACAAGAGGAAAAAGAGGAGAAAGAAAGAACAGGTAAACAAAGCTTCACATCTTGAAGGTGACAATGGATACCATCAAGAAGACAACAAAGCCAATGGAGATACTGCAGAGTCTGATAATCTGAATCATATATTTTCTGAAAGAAAAGAGCAGCATCATAAGCTAGCAAATGAAATTGTGGATGATGGTGCTCATGACATTCCTGTTGGAAATCAATCTGAGGATAGAAAAATTAAGAAAAAGAAAAAAAAGATAAAAAGTCAGGGCAATGGGGAAGTTGTAAATAAGGCGGCCGGTGCAGAGCCTTCACAAGTTAGAAAATTGTCAAATGGACTAGTTATTGAAGAGCTCGAGTCGGGGACAAAAGATGGCAAAATTGCTGCATTAGGGAAAAAGATCAGCATCCACTACACTGGCAAGTTGAAGGAAAATGGAGTAGTATTTGAGTCAAATGCTGGCCAAGCTCCTTTCAAATTTCGCCTTGGTAAAGGAGAAGTTATTGAGGGTTGGGATGTTGGCCTTGAAGGCATGCAAGTTGGAGAAAAGAGAAGACTTGTAATTCCTCCATCAATGACGTCTAAGGGTGATGGACACAGTGACAGTGCCAAAATACCACCAGATTCATGGTTGGTTTATGATTTCGAACTGGTTAAAGTTCATTGA 1926 0.4008 MAFWGVEVKSAKPFTHEYDSSKGRLHISMATLGFGTSTAKSTLQCNVGNRSPVYLCSLYPGNTESLQLNLELEEDDKVIFSVLGPRSIHLCGYYLASTFRKTIAAERESYGEDIADTETEKSDYSDEDDYDDSFIDDDDDPEVFPPTPISNEVTVEEASRDSRPKGKKGNRGRLRKKYQSVDSDDDGSLEQKIIVNDSVDDQYGLPISSLYKNKTSQMALFEESDNNIDRGADDAGNMNGEDDRNSNTETNLKTADVFVDCQMQREAELSDHLVDPCNPMDVEYVKKLKKKKKGKGKETKSPSSDQSIKLNNAVQDEPKMDKMTQGFLEVNEHQQQHADDKETEITDKILPSSEVGQGQGKKAKKKRKELSKEGTVFISNDAYHSNPSNLPQRDEHNKQDTVNEDVKISDNVALPSAEMDPDKRKKRRKKEQVNKASHLEGDNGYHQEDNKANGDTAESDNLNHIFSERKEQHHKLANEIVDDGAHDIPVGNQSEDRKIKKKKKKIKSQGNGEVVNKAAGAEPSQVRKLSNGLVIEELESGTKDGKIAALGKKISIHYTGKLKENGVVFESNAGQAPFKFRLGKGEVIEGWDVGLEGMQVGEKRRLVIPPSMTSKGDGHSDSAKIPPDSWLVYDFELVKVH. 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00026 641 Gene3D - 492 641 IPR046357 GO:0003755
Seca5g00026 641 MobiDBLite consensus disorder prediction 110 186 - -
Seca5g00026 641 MobiDBLite consensus disorder prediction 226 240 - -
Seca5g00026 641 MobiDBLite consensus disorder prediction 333 348 - -
Seca5g00026 641 MobiDBLite consensus disorder prediction 391 405 - -
Seca5g00026 641 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Seca5g00026 641 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 551 641 IPR001179 GO:0003755
Seca5g00026 641 MobiDBLite consensus disorder prediction 119 143 - -
Seca5g00026 641 Gene3D Nucleoplasmin core domain 1 98 - -
Seca5g00026 641 MobiDBLite consensus disorder prediction 222 251 - -
Seca5g00026 641 SUPERFAMILY FKBP-like 521 640 - -
Seca5g00026 641 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 548 638 IPR001179 GO:0003755
Seca5g00026 641 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 372 - -
Seca5g00026 641 MobiDBLite consensus disorder prediction 288 459 - -
Seca5g00026 641 MobiDBLite consensus disorder prediction 484 512 - -
Seca5g00026 641 MobiDBLite consensus disorder prediction 417 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00026 Seca-Chr5 647532 655527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00026 551 638 Calmodulin-binding Proteins AT5G48570 40.449 3.09e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00026 K14826 - gmx:100798135 579.711