Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00011 ATGAATCTGACCCCAACTACAATTGCTATTAGCACTGTGATTGCTACGGTACTGATATGGTGGATTTGGAGCGCACTGAACTGGGTGTGGTTCAGACCAAAGAGCATAGAAAAGCGTCTCAAGCAACAGGGTCTCCAAGGCAATTCCTACCGCCCTTTAGTTGGAGACATCAGAGATATGGTTAAAATGATCAAGGAAGCCAAATCCAAACCCTTGGATCCTTACTCTAACAACATTGCGCCCCGTGTATTGCCTTTCGTTGTCCACACCATCGCTAAATACGGTAAAAATTCATTTATGTGGCTTGGACCAAGACCACGGCTATTCATCATGGATCCAGACAAAATCAAAGAAATCGCTAATAAGGTGTATGAATTTCAAAAGCCCGATACGAGTCCACTTTTCAAGCTTCTAGCATCAGGCTTTGCAAATTATGATGGCGACAAATGGGCTAAACACAGGAGGATCGTCAGCCCAGCATTCAATGTAGAGAAACTCAAGCTGTTGGTACCGATATTTTGCCAATGCTGCGATGATATGATCAGCAAATTGGAGAGTGTGGTATCTTCGTCTAATGGGTCATGTGAGTTAGATATATGGCCTTTCGTCCAAAACGTTTCAAGCGATGTACTCGCTCGCGCAGGCTTTGGAAGTAGCTATCAGGAAGGAAAAAGAGTATTCGAACTTCAAAGGGAAATGCTTCAACATACAATGACACTTTTTAAGTTTGCTTTTATTCCAGGTTACAGGTTTCTGCCAACATATACCAACAGGAGGATGAAAGCAATTGACAAAGAAATTCGAGGATCACTTATGGGTATCATCAACCGAAGATTAAAAGCAATGGATGCAGGGGAGCCAACTAACAATGACTTATTAGGCATACTTTTGGAATCAAATTACAAGGAATCTGAAAAGAGTAATTCTGGTGGAGGAATGAGTTTAAGGGATGTAGTCGAAGAAGTTAAGCTGTTTTACTTGGCAGGGCAGGAAGCAAATGCAGAGTTGCTGGTTTGGACTATGTTGATACTAAGCAAGCATCCTGATTGGCAGGCAAAGGCGAGGGAGGAAGTTTTCAAAGTGTTTGGTAATGAAAAGCCAGATTATGATAAGCTAGGTCAACTTAAAATTGTGTCGATGATTCTACAGGAGAGTCTCAGACTATACCCACCAGTTGTTATGTTCGCTAGATATCTTCGTAAAGATGCAAAACTTGGTGAGTTAACAATTCCTGCAGGAGTGGAGCTAGTAGTACCTGTGTCAATTTTACACCAAGAAAAGGAGTTTTGGGGCGATGATGCTGGGGAGTTCAAACCAGAAAGATTCTCTGAAGGAGTCTCAAAGGCAACAAATGGCAAAGTCTCTTACTTGCCATTTGGATGGGGCCCTCGACTCTGCATAGGACAGAACTTTGGTTTGTTAGAAGCAAAAATAGCTTTGTCCATGATCCTGCGACATTTCTCCCTTGAACTGTCCCCTTCATATACTCATGCTCCATCCTTTATCATTACTCTTCAGCCTGAGCGCGGGGCTCATATCATTTTACGTAAACTCTAG 1557 0.4245 MNLTPTTIAISTVIATVLIWWIWSALNWVWFRPKSIEKRLKQQGLQGNSYRPLVGDIRDMVKMIKEAKSKPLDPYSNNIAPRVLPFVVHTIAKYGKNSFMWLGPRPRLFIMDPDKIKEIANKVYEFQKPDTSPLFKLLASGFANYDGDKWAKHRRIVSPAFNVEKLKLLVPIFCQCCDDMISKLESVVSSSNGSCELDIWPFVQNVSSDVLARAGFGSSYQEGKRVFELQREMLQHTMTLFKFAFIPGYRFLPTYTNRRMKAIDKEIRGSLMGIINRRLKAMDAGEPTNNDLLGILLESNYKESEKSNSGGGMSLRDVVEEVKLFYLAGQEANAELLVWTMLILSKHPDWQAKAREEVFKVFGNEKPDYDKLGQLKIVSMILQESLRLYPPVVMFARYLRKDAKLGELTIPAGVELVVPVSILHQEKEFWGDDAGEFKPERFSEGVSKATNGKVSYLPFGWGPRLCIGQNFGLLEAKIALSMILRHFSLELSPSYTHAPSFIITLQPERGAHIILRKL. 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00011 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 20 509 - -
Seca5g00011 518 CDD CYP72 84 514 - -
Seca5g00011 518 Pfam Cytochrome P450 92 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00011 518 SUPERFAMILY Cytochrome P450 81 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00011 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Seca5g00011 518 FunFam Cytochrome P450 734A1 30 518 - -
Seca5g00011 518 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00011 518 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00011 518 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00011 518 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00011 518 Gene3D Cytochrome P450 29 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00011 518 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00011 518 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00011 518 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g00011 518 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00011 Seca-Chr5 311642 314310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00011 1 518 Cytochrome P450 AT3G14690 53.475 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00011 - K24179 gmx:100801959 920.613