Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g12190 ATGATGGATGATGATATGGAGAGCGGTACCTTGGGGTCTTACCAGGACAGGCCAAGAACATTCCCCAACATGCGTAGTAAAGCTTACACCCCACTGATATTTCGTATTCTACTGGGTATAAACGTTCGTGTCCTGTTCATTCTTTTGTTCCTGGGGTTTGGAGCTATCTTTTACATGGGAGCAAGTACATCTCCAATTATTGTGTTTGTCATCTCTATTTGTATTCTCAGCTTCCTTGTTTCAATATATCTTACAAAGTGGGTGCTTGCAAAAGATGAGGGCCCCCCTGAAATGGTTCAGATATCTGATGCTATACGAGATGGAGCTGAAGGATTTATCAGGACCCAGTATGGGAGTATATCCAAGATGGCGATGTTGCTTGCTCTTGTCATTCTTTGCATATATTTGTTTCGCAGCACAACTCCTCAACAGGAATCTTCTGGCATGGGAAGGTCAACATCTGCATACATCACTGTAGCTGCTTTCCTTTTAGGTGCCCTTTGTTCAGGTATTGCTGGATATATAGGGATGTGGGTGTCAGTTCGTGCCAATGTCAGAGTCTCTAGTGCTGCAAGACGGTCTGCAAGAGAGGCATTGCAGGTAGCTACTCGTGCAGGTGGTTTATCTGCTATCACTGTTGTTGGTATGGCTGTAATTGGTATAGCAGTCCTTTATGCCACATTTTATGTTTGGTTGGGAGTGGACTCACCAGGTGCAATGAAGGTTACTGATTTGCCTCTTCTTCTAGTTGGATATGGATTTGGTGCCTCCTTTGTTGCACTGTTTGCCCAGTTGGGTGGTGGAATATACACTAAAGCAGCTGATGTCGGGGCAGACCTCGTTGGAAAAGTAGAACAGGGAATACCTGAAGATGACCCAAGGAATCCTGCTGTTATTGCTGATCTGGTTGGAGACAATGTGGGTGATTGTGCTGCTAGAGGTGCTGATCTTTTTGAAAGCATTGCAGCTGAAATAATCAGTGCCATGATACTTGGAGGAACAATGGCACAACGCTGTAAAATCGAAGATCCATCTGGCTTCATCTTGTTTCCTCTTGTTGTTCACTCGTTTGATCTGGTAGTTTCATCGGTTGGAATATTTTCTATTAGGGGTACACGTGAATCTGGAGTAATGGCTCCTATGGAGGATCCGATGACAATTCTTCAGAAAGGATATTCTGTTACAATAGTTTTAGCTGTTCTGGCATTTGGTCTGTCTACCCGGTGGTTACTTTATGTTGAGCAAGCACCTTCAGCATGGTTCAATTTTGCTTTGTGTGGGTTGGTTGGTATTATCACAGCTTACATTTTTGTCTGGATCACCAAGTATTATACTGACTACAAGCATGAGCCTGTGCGCATATTAGCCCTTTCTAGCTCTACGGGCCATGGGACCAACATAATTGCCGGAGTCAGTTTGGGCCTGGAATCTACTGCTCTTCCTGTCCTTGTGATCAGTGTGTCGATTGTCTCAGCTTTCTGGCTGGGTCACACCTCTGGACTATTAGATGAAACAGGAAACCCAACTGGTGGGCTGTTTGGCACAGCTGTGGCAACAATGGGAATGCTTAGCACTGCTGCCTATATTCTTACCATGGATATGTTTGGCCCAATTGCTGATAATGCTGGAGGAATTGTAGAGATGAGCCAGCAGCCTGAAAGTGTCCGAGAGATCACTGATGTCCTTGATGCTGTGGGAAATACAACCAAAGCCACCACTAAAGGATTTGCCATTGGTTCTGCTGCTCTTGCATCTTTCCTTTTGTTTAGCGCTTACATGGATGAGGTTTCTACATTCGCTCATGAACCTTTTAAACAGGTTGATATTGCAATTCCAGAAGTTTTCGTTGGTGGGTTGCTGGGTTCTATGCTTATATTTGTCTTTAGTGCTTGGGCCTGTGCTGCTGTTGGCCGAACTGCACAAGAGGTTGTCAATGAAGTAAGAAGGCAATTCATTGAGAGGCCTGGTATTATGGATTACAAGGAGAAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCTGCATCATTACGAGAGATGATAAAACCTGGTGCTTTGGCAATTATTTCACCTATTGTAATTGGTGGGTTAACTTCTGTTTTTTAA 2109 0.4414 MMDDDMESGTLGSYQDRPRTFPNMRSKAYTPLIFRILLGINVRVLFILLFLGFGAIFYMGASTSPIIVFVISICILSFLVSIYLTKWVLAKDEGPPEMVQISDAIRDGAEGFIRTQYGSISKMAMLLALVILCIYLFRSTTPQQESSGMGRSTSAYITVAAFLLGALCSGIAGYIGMWVSVRANVRVSSAARRSAREALQVATRAGGLSAITVVGMAVIGIAVLYATFYVWLGVDSPGAMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIEDPSGFILFPLVVHSFDLVVSSVGIFSIRGTRESGVMAPMEDPMTILQKGYSVTIVLAVLAFGLSTRWLLYVEQAPSAWFNFALCGLVGIITAYIFVWITKYYTDYKHEPVRILALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIVSAFWLGHTSGLLDETGNPTGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSTFAHEPFKQVDIAIPEVFVGGLLGSMLIFVFSAWACAAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASASLREMIKPGALAIISPIVIGGLTSVF. 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g12190 702 Pfam Inorganic H+ pyrophosphatase 75 698 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca4g12190 702 PIRSF H+-PPtase 59 701 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca4g12190 702 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 91 697 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g12190 Seca-Chr4 262654918 262674519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g12190 1 696 Primary Pumps ATPases AT1G16780 86.351 0.0 1250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g12190 K23025 - gmx:100787805 1235.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g12190 4 262654918 262674519 Seca4g12190 4 262654918 262674519 ECH