Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g12186 ATGACAAGGCTCCCAAGCAGTCTCAAGTTGGGATCCAGATCCAGAAAGATGATACACAAACCATTATTGATGGATGGAGAATTGTCCAATGGAAGCAGCAAGGAATATTCAAAAGTTCCCAAAGGATATATCGCTGTTTATGTTGGGCCACAGTTTCGAAGGTTTGTGATTCCAATAAGCTTCTTGGCCATGCCAGACTTCACGGTTTTGATGGAGTGTGTGGCGGAGGAATTTGGATGCGACCATCATGGACATGGTGCTCTCCATATCCCTTGCGATGAACACCATTTTCACCATATTTTGACCACTTGTTTCGCAACACAACGGATGATTTCTTCTAAGAATTACAATATCTAA 357 0.4258 MTRLPSSLKLGSRSRKMIHKPLLMDGELSNGSSKEYSKVPKGYIAVYVGPQFRRFVIPISFLAMPDFTVLMECVAEEFGCDHHGHGALHIPCDEHHFHHILTTCFATQRMISSKNYNI. 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g12186 118 Pfam Auxin responsive protein 15 102 IPR003676 GO:0009733
Seca4g12186 118 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 30 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g12186 Seca-Chr4 262606270 262606626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g12186 9 101 Calmodulin-binding Proteins AT3G43120 41.346 1.45e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g12186 K14488 - vun:114165672 132.88