Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g12135 ATGAAAGACAAGGCTTGTGAGCTTTGCAATCAACAAGCTTTCCTCTATTGCCCTTCCGACGCTGCCTATCTCTGCTGGAACTGCGACGCCACTGTTCATGGCGCCAATTTCCTCGTAGCTCGCCACATCCGCCACAGCCTCTGCTCTAAATGCAACTGTTTCACCGGAAATCACATCTCCGGCGCTACACTCTGCTGTCTCCCATCAACCTGTCGCTCTTGCTCGCCGGAAAATCCTTCCGATGATGCCGGTTCCGTCCTTTCTGATTCCTCTGAGTCTTGCACTACGGCACCGAAGAAGACAAAGGCTAGAAGCACGACGGAGGGGAGGATGAGAAGTTGTTCGAGTTCCGTGACCGATGATGCATCTCCGAGTCCGGCAACGAAAAAGAGGCGGGGGAATGATGGATCGGTGGCGGAAGAGGTGTTTGTGAAATGGAGCAGGGAGTTAGGGTTAGGGTTAGGGGTGAACGGTAATCGCATGGCGTCGCAGGCCCTGGATTTGTGTCTGGGAACGTGGAGGTCTGTACCGTTCAGGGTGGCTGCTGCGACGTCGTTTTGGTTGGGCCTGAGATTTTGTGGGGACGCCACGTATCAGAATCTGTCGAGGTTGGAAGCAATCTCAGGGGTGCCAGCTAAGCTCATTCTAGCCGCACATGCCAAGCTCGCACGTGTCTTCTCACACTGCCGCGAATTGCAAGAAGGATGGGACGAGTCCTAA 720 0.5458 MKDKACELCNQQAFLYCPSDAAYLCWNCDATVHGANFLVARHIRHSLCSKCNCFTGNHISGATLCCLPSTCRSCSPENPSDDAGSVLSDSSESCTTAPKKTKARSTTEGRMRSCSSSVTDDASPSPATKKRRGNDGSVAEEVFVKWSRELGLGLGVNGNRMASQALDLCLGTWRSVPFRVAAATSFWLGLRFCGDATYQNLSRLEAISGVPAKLILAAHAKLARVFSHCRELQEGWDES. 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g12135 239 MobiDBLite consensus disorder prediction 81 134 - -
Seca4g12135 239 SMART bboxneu5 1 47 IPR000315 GO:0008270
Seca4g12135 239 CDD Bbox1_BBX-like 5 47 - -
Seca4g12135 239 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Seca4g12135 239 MobiDBLite consensus disorder prediction 81 124 - -
Seca4g12135 239 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 5 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g12135 Seca-Chr4 262202786 262203505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g12135 6 239 C2C2-CO-like Transcription Factor Family AT3G21150 32.218 3.40e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g12135 - - gmx:100781783 305.064