Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g12125 ATGGACAACTTGAGAGCTATTCTTCAAGCAATTCAGACACAGCCCTTTGCCACCTCCGTCGTGTTAGGTGGTTTGTCTCTCCTCTTTTTGCTCTTCCTCAAGCAGAGAGTCAGAGGAGGACTCAGTCATTTACTCATGAGCAGAAAGAGTAAGTTGATTATTATTGCAGCGGTTCCAGGGCTACCAGTGATAGGGAATCTGTTGCAATTGAAGGAGAGGAAACCTTACAAGACGTTCATGCAGTTAGCTGAGAAATATGGGCCCATTTATTCCATCAGAACCGGTGCTTACACTCTCATAGTTCTCAACTCCGTCCAAGTTGCCAAGGAGGCAATGGTGACACGATCTTCGTCCACTTCAACAAAAGTACTAACATATGCACTCAAGATTCTGACTTTTGATAAGTGCATGGTTGCTATGAGTGACTACAATGAATTTCACAAAAAGATCAAAAGGCATATTCTTACTAGCCTTCTCGGAGCCAATGCACAGAAGCGACACCGTTCCCACAGGGAAGCCATGATGAAAAATATTTCAAGGAAGCTCAATGAACATGTGAAGGCCTTTTCTTCTTCAGCTGTTAATTTTAGGAATATATTTGCATCTGAACTTTTTCAACTAGCACTAAAACAGGGTCTTGGAAATGATGTAGAATCCATTTATGTGGAGGAGTTTGGAAGTACTTTGTCAAGAGAGGACATATATAAGATTCTAGTGCTTGACATCATGGAGGGTGCAACTGAGGTGGATTGGCGAGATTTCTTTCCATACTTGAAATGGGTTCCAAACAAGAGTCTAGAGATGAAAATCCAGAAAATGTACTTTCGTAGAAAAGCTGTGATGAAGGCTTTGATTAATGAGCAAAAGAAGCGAATAGCTTCAGGAAAGGAAGTAGATTGTTATATTGACTACCTGTTATCTGAAGCAAAAGAACTGACAGAAGAACAAGTTTCCATGCTGCTTTGGGAGAGCATTATTGAGTCATCAGATACTACATTAGTCACAACAGAGTGGGCTATGTATGAACTTGCTAAAGACAAAAATTGTCAGGTTGTTTGTTTTTCTTTTCTTTTCTTTTTGTGTTTGGACCGTCTCTATGAGGAGATAAAAAATGTGTGTGGATATGAAAAGGTTACTGAGGAAAAATTGTCTAAGCTACCATACTTGGGGGCTATCTTTCATGAAACTTTAAGGAAGCATAGTCCAGCTCCAATTGTCCCATTAAGATGTGTTCAAGAAGATACCCAATTGGGAGGATATCATATTCCTGCTGGAAGCCAGATTGCAATAAACATATATGGATGTAACATGGACAAGAAGCAGTGGGAAAATCCCAACCAGTGGATGCCTGAGAGATTTCTTGATGAGAAATATGACTCCATGGATTTGTACAAGACCATGGCCTTTGGAGCAGGGAAAAGGGTGTGTACTGGGTCTCTTCAAGCAATGCTGATAGCTTCCACAGCAATTGGAAGAATGGTTCAAGAATTTGAGTGGAAACTCAAAGAAGGGGAGGAAGTAGAGGATGTGGATACGGTGGGCCTTACCACCCACAGGCTCCACCCCCTGCAAGTGAAACTCAAGCCAAGAAATTAA 1596 0.4123 MDNLRAILQAIQTQPFATSVVLGGLSLLFLLFLKQRVRGGLSHLLMSRKSKLIIIAAVPGLPVIGNLLQLKERKPYKTFMQLAEKYGPIYSIRTGAYTLIVLNSVQVAKEAMVTRSSSTSTKVLTYALKILTFDKCMVAMSDYNEFHKKIKRHILTSLLGANAQKRHRSHREAMMKNISRKLNEHVKAFSSSAVNFRNIFASELFQLALKQGLGNDVESIYVEEFGSTLSREDIYKILVLDIMEGATEVDWRDFFPYLKWVPNKSLEMKIQKMYFRRKAVMKALINEQKKRIASGKEVDCYIDYLLSEAKELTEEQVSMLLWESIIESSDTTLVTTEWAMYELAKDKNCQVVCFSFLFFLCLDRLYEEIKNVCGYEKVTEEKLSKLPYLGAIFHETLRKHSPAPIVPLRCVQEDTQLGGYHIPAGSQIAINIYGCNMDKKQWENPNQWMPERFLDEKYDSMDLYKTMAFGAGKRVCTGSLQAMLIASTAIGRMVQEFEWKLKEGEEVEDVDTVGLTTHRLHPLQVKLKPRN. 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g12125 531 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g12125 531 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g12125 531 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g12125 531 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 18 531 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Seca4g12125 531 FunFam Ent-kaurene oxidase 2 47 531 - -
Seca4g12125 531 CDD CYP77_89 85 524 - -
Seca4g12125 531 SUPERFAMILY Cytochrome P450 59 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g12125 531 Pfam Cytochrome P450 60 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g12125 531 Gene3D Cytochrome P450 48 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g12125 531 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g12125 531 PRINTS E-class P450 group I signature 431 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g12125 531 PRINTS E-class P450 group I signature 107 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g12125 531 PRINTS E-class P450 group I signature 83 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g12125 531 PRINTS E-class P450 group I signature 390 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g12125 531 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g12125 Seca-Chr4 262142830 262145033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g12125 46 530 Cytochrome P450 AT5G25900 61.728 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g12125 K04122 - gmx:100802970 733.406